prot_S-dermatodea_contig1206.1284.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1206.1284.1
Unique Nameprot_S-dermatodea_contig1206.1284.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length593
Homology
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BLAST of mRNA_S-dermatodea_contig1206.1284.1 vs. uniprot
Match: A0A6H5JNI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI7_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 3.010e-113
Identity = 223/433 (51.50%), Postives = 280/433 (64.67%), Query Frame = 0 
Query:   34 ASNGQPSRL---LLETPIHPAGLGEDA---AMRVTPTLSLKRRRLLRLEDGNLIVLPTNIYKQAGGVKLDLSLGGFRIDGEKCTLKNRAFNFGVLQGFTRENLLALRAFRNILIPPDRA-VETPINPIAAAEVLFRYDEEHLKPAPGT---DQSSCEGPGAWIPDSRELHVTFVGSSMEIRVKAGELRAVDRPLQCKLALEALKRDPKVLAETLEPAPPLTRGPGWGGSDLIGMEPGTTGFARAP-------SVP-----------------AAVGGESAAYNAFNAHIPESSLDAGMESYGEG--------SASRQRXXXXXXSVV------------ADDGVTYDLPTYVQNVETKQQRSTLRLKMPLNGFLVNGEDVSVADLVVAYGLDVTRQNLLALRACRDAVLTHFAGPDLVKRVVAAEVFHVWAKR 412
            ASNG P+ +   +       AG+       A    P  + KR+RL+RLE G L+V+PTNIY+QAGGVKLD++LGGFRID EKCTLKNRA+NFGVL GFTRENLLALRAFR+ L+P DR+ + + I+ I AAE + RYDEEH+KP  G+   ++SS  G G WIPDSR +H+T+ GS ME+RVKAG+LRAV+RPLQCK+ALEALK DPKVL   LEPAPP     G GG++ +G EPG TGF+R+P       S P                 A  GG +A ++         + D  ++ +  G        S S  RXXXXXX                +  V YDLP +VQ VE KQ R +LRLK+PL GF+V+GE V  ++LVVA+GLD+TR+NLLALRAC DAVL +FA PDLVKRV+A EVF VW +R
Sbjct:   62 ASNGTPTVVAASVFSAAAAAAGISHTTLPIAATTKPVAAPKRKRLMRLESGELVVIPTNIYRQAGGVKLDITLGGFRIDNEKCTLKNRAYNFGVLPGFTRENLLALRAFRDTLLPTDRSKMPSSIHTIIAAEAMIRYDEEHVKPPEGSSFAEESSHYGAGRWIPDSRVIHMTYTGSDMELRVKAGDLRAVNRPLQCKMALEALKSDPKVLEGKLEPAPPSVDVYGSGGAETVGPEPGATGFSRSPESLQPASSDPRSGGRRVAGGGEGXXSRAPAGGANAEFSLLFGGAAAFANDGFVDDHDNGRPRTKDLDSTSMHRXXXXXXXXXXXXXXTEEGGEGGEGAVEYDLPLHVQIVEGKQCRPSLRLKVPLTGFMVDGEIVPSSELVVAHGLDITRKNLLALRACCDAVLANFAAPDLVKRVIAGEVFRVWTRR 494
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1206.1284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNI7_9PHAE3.010e-11351.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1206contigS-dermatodea_contig1206:15634..18395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1206.1284.1mRNA_S-dermatodea_contig1206.1284.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1206 15632..18395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1206.1284.1 ID=prot_S-dermatodea_contig1206.1284.1|Name=mRNA_S-dermatodea_contig1206.1284.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=593bp
SPVGTPLGSALAHDPTTPTNLVRQLGRDLGATPASNGQPSRLLLETPIHP
AGLGEDAAMRVTPTLSLKRRRLLRLEDGNLIVLPTNIYKQAGGVKLDLSL
GGFRIDGEKCTLKNRAFNFGVLQGFTRENLLALRAFRNILIPPDRAVETP
INPIAAAEVLFRYDEEHLKPAPGTDQSSCEGPGAWIPDSRELHVTFVGSS
MEIRVKAGELRAVDRPLQCKLALEALKRDPKVLAETLEPAPPLTRGPGWG
GSDLIGMEPGTTGFARAPSVPAAVGGESAAYNAFNAHIPESSLDAGMESY
GEGSASRQRRRKKKKSVVADDGVTYDLPTYVQNVETKQQRSTLRLKMPLN
GFLVNGEDVSVADLVVAYGLDVTRQNLLALRACRDAVLTHFAGPDLVKRV
VAAEVFHVWAKRTEGCRPDGKLEPLAAAPHLPTTIEGTTVEQNVPISLPQ
VNAPASELTATATPRETRATSAMEVCTSAGTAGGTSLVAPQAGVAAAETM
SLFQLADSDVVKLAGPANSPGGPRVEIQMMVGDLRRSRHSRVGEFKQLLT
AMIGDAIVQAGELDVVTPPIFPSQSLTEHNSSGAAAKVAAARV
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