prot_S-dermatodea_contig1206.1281.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1206.1281.1
Unique Nameprot_S-dermatodea_contig1206.1281.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length194
Homology
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A6H5JJG5_9PHAE (DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJG5_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 5.460e-80
Identity = 131/191 (68.59%), Postives = 155/191 (81.15%), Query Frame = 0
Query:    1 RSDRGGLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRM----GECPGRMGAS-GVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGGMLPPGANVIEYITGEIA 186
            RS+R GLL+LATVPLVWGTY PSVKY+YQMG+ PPGL+FNF CY+VSV TFAAVA ++  R+      GEC GR G   GV E   + P++ +L +RYA RAG ELG WLFL GTV  WGL+LTSASRA FLVQLTTVIVPVLEAF+GR+KLKPQVWLAC LATVGVALVSLGG+LPPGA++ +YI+G ++
Sbjct:  104 RSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVASLNTARRHRTATAGEC-GRWGKRRGVEEEAELPPKEKALRNRYAARAGAELGLWLFLAGTV--WGLELTSASRAGFLVQLTTVIVPVLEAFVGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLS 291          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A835Z2R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 9.460e-36
Identity = 84/189 (44.44%), Postives = 106/189 (56.08%), Query Frame = 0
Query:    2 SDRGGLLLLATVPLVWGTYGPSVKYMYQMGD--GPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIR----------------PQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGGMLP 172
            S    L +LATVP VWGTY PSVK+M  +G    PPGL FN  CYLVS A  A    V   R R         A+   +T+A+                    T +      +AG ELGGWLF G T+Q++GLQ T ASRAAFLVQ TT+IVP++E+ L R+ +  +V +AC  ATVG+AL+S G  LP
Sbjct:   37 SRAAALAVLATVPCVWGTYTPSVKFMESLGPLVQPPGLFFNAACYLVSGAVLATAQLV---RSRSRSSNNTSPAASAVQTEALNNAGQIAELTEPDLESDSASTPVRSSVLAQAGAELGGWLFAGSTLQIYGLQYTGASRAAFLVQTTTIIVPLIESLLQRRLVPAKVLVACFTATVGIALMSFGDALP 222          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: K0RU20_THAOC (EamA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU20_THAOC)

HSP 1 Score: 118 bits (295), Expect = 8.570e-28
Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 0
Query:    2 SDRG-GLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAF-LGRQKLKP-QVWLACGLATVGVALVSL 167
            ++RG G+L+L TVPL WGTY P+VKYMY+M    PG VF+ G YLV+  T   ++ +               A+   E K  R +++   +    R G ELG +LF+G  +QV GLQ   A RAAFLVQLTTV+VP++ A  +G     P Q WLAC +A VGV+++ +
Sbjct:  117 AERGLGILVLLTVPLAWGTYTPAVKYMYEMEPAIPGFVFSAGYYLVAAVTLRLLSSLQ--------------ANESNELKVDRAEESE--EGLDIRGGWELGSYLFVGNALQVVGLQTVPADRAAFLVQLTTVLVPLVAALSVGALSAVPAQTWLACVVAFVGVSVMGI 269          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A7S1FR69_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR69_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.400e-26
Identity = 76/194 (39.18%), Postives = 103/194 (53.09%), Query Frame = 0
Query:    2 SDRG-GLLLLATVPLVWGTYGPSVKYMYQMGDGP-PGLVFNFGCYLVSVATFAAVAWV-SGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLG-----RQKLKPQVWLACGLATVGVALVSLGGMLPPGANVIEYITGEIAI 187
            +DR  GLL+L +VP+VWGTY P+V+Y+Y + D P PGL+F+   Y ++ AT + VA   S +       P R G S   E  A   +DT   D      G ELG +L     +QV GL      RAAFLVQ TTV+VP+L          +  +  + W ACG+AT GV ++S GG    G  +    TG+I I
Sbjct:  130 ADRTRGLLILLSVPVVWGTYAPAVRYLYAVSDPPLPGLIFSAAYYSLASATLSIVAATFSNIDDSSRNVPNREGTS--KEIAAAEEKDTLRRD------GSELGAYLTFANALQVLGLMTVDGDRAAFLVQTTTVMVPILFGLSNLATKKKMNVDGRTWSACGVATAGVYIISSGG----GGGLGGIGTGDILI 311          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A7S0GYT0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GYT0_9EUKA)

HSP 1 Score: 108 bits (271), Expect = 6.710e-26
Identity = 60/182 (32.97%), Postives = 100/182 (54.95%), Query Frame = 0
Query:    9 LLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGGMLPPGANVIEYITGEIAIGSV 190
            LL+ +PLVWGTY P ++++YQ+   PP  + N   Y+VSV++      ++ + Q  G  P                       + + +AGL+LG WLFLG T+Q+ GL+ T+ ++A  LVQLTTVIVPVLE+ + R+ +  ++W+   +A  GV L++L             ++G +++ S+
Sbjct:   83 LLSLIPLVWGTYTPVIRFVYQIDSPPPSSLLNLAFYVVSVSSLI----LTSILQNRGPLP----------------------SKSSLKAGLDLGTWLFLGSTMQLLGLKFTTGTQAGVLVQLTTVIVPVLESIVLRKSVAKRLWIGIIIALCGVLLLTLD-------QAANGVSGSVSLASM 231          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: B7FRX7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRX7_PHATC)

HSP 1 Score: 111 bits (278), Expect = 7.150e-26
Identity = 64/198 (32.32%), Postives = 103/198 (52.02%), Query Frame = 0
Query:    1 RSDRGGLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQ--KLKPQVWLACGLATVGVALVSLGGM--------LPPGANVIEYITGEIAIG 188
            R  R GLL+L TVP+ WGT+ P+V+Y+Y +    PG VF+   YLV+ ++     ++S  ++  G                   +   ++  +  + GLELG +LF+G  +QV GLQ   + RAAFL+QLTT+ VP+L+A L R    +  + W+AC +A  GVA + L           L P   ++  +  +++ G
Sbjct:    7 RERRSGLLVLLTVPVAWGTFEPAVRYLYTIDPPIPGFVFSTCYYLVASSSLYLACFLSQTKKSDGN------------------KSLEVSQPWPIQGGLELGSYLFVGNALQVIGLQTVPSDRAAFLLQLTTIFVPLLDATLARNLYAIPGRTWMACWIALAGVATMGLDRSNTSNSFQNLEPSLGILNDVLSQLSGG 186          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A7S2IBK1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IBK1_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 8.230e-26
Identity = 65/179 (36.31%), Postives = 92/179 (51.40%), Query Frame = 0
Query:    1 RSDRGGLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFN--FGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGGMLPPGANV 177
            ++  G +  L  VP+ WGTYG +VK  Y++   PP  +    F C        A +A                 AS   E +A  P +          AGLELG WLFLG  +Q+ GLQ T+A+RA FLVQLTTV+VP+ EA L  ++L  ++W A  +AT G+A++S  G    G+ +
Sbjct:   68 KASPGRVAALVAVPVAWGTYGAAVKVAYELPHPPPTPLLQALFSCVSFGSLLLAGLA--------------SSAASSADENEAATPAERGPDKLAVIAAGLELGLWLFLGQAIQLQGLQRTNAARAGFLVQLTTVLVPLSEAVLLGRQLPARLWAASLVATAGIAIISAEGFGVDGSTL 232          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: F0YKC3_AURAN (EamA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKC3_AURAN)

HSP 1 Score: 110 bits (276), Expect = 1.150e-25
Identity = 67/176 (38.07%), Postives = 92/176 (52.27%), Query Frame = 0
Query:    2 SDRGGLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGGMLPPGANV 177
            SD   + +L +VP+VWGTY P+VK +Y +   PPG VF+   Y+V++    A+        R    PG                  + AD  A RAGLELG +L+ G   QV GL+  SA  AAFLVQLTTV+VPVLE+    + +  +  LAC +A  GVA++   G+      V
Sbjct:   40 SDAARVAVLCSVPVVWGTYAPAVKAVYALPAPPPGAVFSLFYYVVALGCLGALG-------RAAAAPG-----------------AAAADEGAARAGLELGAYLYAGNLFQVVGLETVSADAAAFLVQLTTVLVPVLESAATGRAVARETQLACAVAFSGVAVLCAEGLAADAGQV 191          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A7R9TUG6_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TUG6_9VIRI)

HSP 1 Score: 109 bits (273), Expect = 2.290e-25
Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = 0
Query:    8 LLLATVPLVWGTYGPSVKYMYQM---GDGPPGL--VFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQVWLACGLATVGVALVSLGG------MLPPG 174
            L+L +VPL WGT+      M  +      PP      N G    S+A   AV     VR   G      GAS         P  ++L   +  R G ELG WLF+G ++Q++ L LT+ASR AFLVQ TTVIVP+LEA L R+ +  + W AC +AT G+AL+S GG       LPPG
Sbjct:    9 LVLTSVPLAWGTWAVVNVLMLNVFVAAGVPPXXXXAINAGIQAASLAALTAVCAARAVRTAGGR-----GAS--------LPAPSALPGAFTLRGGAELGAWLFMGSSLQLYALTLTTASRVAFLVQATTVIVPMLEAALCRRAVSGRTWFACAMATSGIALLSFGGGGAPASALPPG 173          
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Match: A0A7S1YBJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBJ7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.060e-25
Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    6 GLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVATFAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLELGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQV--WLACGLATVGVALVSLGGM 170
            G L+L TVPL WGTY P V+Y+Y++    PG VF+   Y V+ +T   + W    +Q   +  G      + E  A  P   +  +++    GLELG +LFLG  +QV GL+   + RA FLVQLTTV+VP+++  L    L   V  W+AC +A  GV ++   G+
Sbjct:   27 GFLVLLTVPLAWGTYVPVVRYLYEIKPPVPGFVFSACYYFVAASTLLTITWAQ-QQQAQAQKDGIADPIELDEDVATSP---ATINQFPLIGGLELGTYLFLGNGLQVLGLKTVPSDRAGFLVQLTTVMVPLVQGALAGNLLSIPVRTWVACAIAFSGVLVMGADGI 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1206.1281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJG5_9PHAE5.460e-8068.59DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835Z2R1_9STRA9.460e-3644.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0RU20_THAOC8.570e-2842.60EamA domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S1FR69_9STRA3.400e-2639.18Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0GYT0_9EUKA6.710e-2632.97Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
B7FRX7_PHATC7.150e-2632.32Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2IBK1_9EUKA8.230e-2636.31Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
F0YKC3_AURAN1.150e-2538.07EamA domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7R9TUG6_9VIRI2.290e-2540.45Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S1YBJ7_9STRA3.060e-2537.72Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 106..166
e-value: 1.2E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR42920FAMILY NOT NAMEDcoord: 4..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..142
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.52
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 101..170
NoneNo IPR availableTMHMMTMhelixcoord: 5..23
NoneNo IPR availableTMHMMTMhelixcoord: 97..116
NoneNo IPR availableTMHMMTMhelixcoord: 126..143
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 150..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1206contigS-dermatodea_contig1206:260..2530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1206.1281.1mRNA_S-dermatodea_contig1206.1281.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1206 260..2530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1206.1281.1 ID=prot_S-dermatodea_contig1206.1281.1|Name=mRNA_S-dermatodea_contig1206.1281.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
RSDRGGLLLLATVPLVWGTYGPSVKYMYQMGDGPPGLVFNFGCYLVSVAT
FAAVAWVSGVRQRMGECPGRMGASGVPETKAIRPQDTSLADRYATRAGLE
LGGWLFLGGTVQVWGLQLTSASRAAFLVQLTTVIVPVLEAFLGRQKLKPQ
VWLACGLATVGVALVSLGGMLPPGANVIEYITGEIAIGSVQTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom