prot_S-dermatodea_contig12005.1249.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12005.1249.1
Unique Nameprot_S-dermatodea_contig12005.1249.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length123
Homology
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: D8LB66_ECTSI (Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 1.660e-71
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0
Query:    1 MEIEVGSLRCMAPSLGIPPQRHYDPSDAEDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTCTGQDEPPLLDK 123
            MEI+VGSLRC+AP+LGIPP RHYDPSDAEDAALRLEWAK LFRAGYRLR+PQ  TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML  TGQDEPPLLDK
Sbjct:    1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQG-TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDK 122          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A835YQW0_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.120e-23
Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    5 VGSLRCMAPSLGIPPQRHYDPSDAEDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRD-VILTTCLFLAGKVTEAPRRLRDVINVLHMLTCT---GQDEPPLLDK 123
            + +LR ++P+L          S  ED   R  W   +FRAG+RLRYPQ ETT TA++LFHRF   E     +R R  V+L TCLFLAGKV E PRRLRDVIN LH+       G  EPP LD+
Sbjct:   10 LAALRHLSPALSSGATSRSGGSQ-EDLRRRRGWTAAMFRAGHRLRYPQ-ETTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHVTAAEPGGGAVEPPRLDQ 130          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: W7TSF1_9STRA (Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.140e-13
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   33 LRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSR--DVILTTCLFLAGKVTEAPRRLRDVINVLHML 110
            +R +  + L  AG RLR PQ ET  TA L+FHRF     + ++ R+R  DV+LTTCLFLA KV E PRR+RD IN ++++
Sbjct:   34 IRQDSVRVLLDAGRRLRLPQ-ETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVV 112          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A6A2YG45_HIBSY (Cyclin-T1-4 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YG45_HIBSY)

HSP 1 Score: 65.1 bits (157), Expect = 8.480e-10
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   29 EDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINV 106
            ++  LR  +  FL   G RL+ PQ  T  TA++  HRF IQ+   KH   R  I T C+FLAGKV E PR L+DVI V
Sbjct:   55 KETYLRKSYCTFLQDLGMRLKVPQV-TIATAIIFCHRFFIQQSHAKH--DRRTIATVCMFLAGKVEETPRPLKDVILV 129          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A672YP81_9TELE (Cyclin-L1 n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A672YP81_9TELE)

HSP 1 Score: 62.8 bits (151), Expect = 1.150e-9
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   33 LRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML 110
            LR+   + +  AG  LR PQ    GT  +LFHRF   +   KH  S +++   C+ LA K+ EAPRR+RDVINV H L
Sbjct:   92 LRILGCELIQSAGILLRLPQV-AMGTGQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHL 166          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A836D856_SHEEP (Cyclin-L1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A836D856_SHEEP)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   25 PSDAEDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML 110
            PS+ +   LR+   + +  AG  LR PQ     T  +LFHRF   +   KH  S +++   C+ LA K+ EAPRR+RDVINV H L
Sbjct:    8 PSETD---LRILGCELIQAAGILLRLPQV-AMATGQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHL 87          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A7S1CMQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.370e-9
Identity = 46/104 (44.23%), Postives = 51/104 (49.04%), Query Frame = 0
Query:   21 RHYDPSDAEDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTCTGQDEPPL-LDK 123
            RH D +  ED  LR     F    G  L  PQ  T   AV   HRF I     KH     V+ T CLFLA KV E PRRLRDV+N    +  +  D PPL LDK
Sbjct:   31 RHADVTPEEDRTLRRACWAFACDVGLGLDVPQN-TVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYS--DAPPLALDK 129          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A2P6NCA9_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCA9_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.550e-9
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   34 RLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML 110
            R +   F+  AG  LR PQ  T  TA++ FHRF    +  ++   RD++ TTCLFLAGK  E P++L+DVI + H +
Sbjct:   29 RKKTCAFIQEAGMNLRLPQL-TIATALVYFHRFFANHKFKEY--DRDIVGTTCLFLAGKTEETPKKLKDVIEMSHRI 102          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A3Q4GHZ0_NEOBR (Cyclin-L1 n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4GHZ0_NEOBR)

HSP 1 Score: 63.5 bits (153), Expect = 2.670e-9
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   30 DAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML 110
            +A LR+   + +  AG  LR PQ     TA +LFHRF   +   KH  S +++   C+ LA K+ EAPRR+RDVINV H L
Sbjct:   77 EADLRILGCELIQSAGILLRLPQV-AMATAQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHL 154          
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Match: A0A0G4IYJ5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS)

HSP 1 Score: 62.8 bits (151), Expect = 2.810e-9
Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   25 PSDAEDAALRLEWAKFLFRAGYRLRYPQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTCTGQDEPPL 120
            P+D E + +R +    +   G RL+ PQ  T  TA  +FHRF  +E +  H      I  TCLF+AGK  E PRRLRDVIN ++       D PPL
Sbjct:    3 PAD-EGSVIRFQATTLIQDVGIRLQVPQM-TIATAQTIFHRFFAKEPLADHDPMD--IAQTCLFVAGKSQETPRRLRDVINTVYRYR--NPDLPPL 92          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12005.1249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB66_ECTSI1.660e-7191.87Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_... [more]
A0A835YQW0_9STRA1.120e-2349.59Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
W7TSF1_9STRA1.140e-1350.00Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A6A2YG45_HIBSY8.480e-1047.44Cyclin-T1-4 n=2 Tax=Hibiscus syriacus TaxID=106335... [more]
A0A672YP81_9TELE1.150e-944.87Cyclin-L1 n=6 Tax=Percomorphaceae TaxID=1489872 Re... [more]
A0A836D856_SHEEP1.270e-941.86Cyclin-L1 n=3 Tax=Boreoeutheria TaxID=1437010 RepI... [more]
A0A7S1CMQ2_9STRA1.370e-944.23Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2P6NCA9_9EUKA1.550e-942.86Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A3Q4GHZ0_NEOBR2.670e-944.44Cyclin-L1 n=1 Tax=Neolamprologus brichardi TaxID=3... [more]
A0A0G4IYJ5_PLABS2.810e-941.67Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 18..107
e-value: 1.0E-10
score: 41.4
NoneNo IPR availableGENE3D1.10.472.10coord: 13..120
e-value: 1.1E-21
score: 79.0
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 21..113
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 19..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12005contigS-dermatodea_contig12005:325..1440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12005.1249.1mRNA_S-dermatodea_contig12005.1249.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12005 112..1440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12005.1249.1 ID=prot_S-dermatodea_contig12005.1249.1|Name=mRNA_S-dermatodea_contig12005.1249.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
MEIEVGSLRCMAPSLGIPPQRHYDPSDAEDAALRLEWAKFLFRAGYRLRY
PQQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRL
RDVINVLHMLTCTGQDEPPLLDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf