prot_S-dermatodea_contig11940.1215.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11940.1215.1
Unique Nameprot_S-dermatodea_contig11940.1215.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length53
Homology
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.610e-21
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            MAGTAVDVALYPLDTIKTRLQSP GF+K+GGLRGVYNGLSAAAVGSAPG   F
Sbjct:   16 MAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALF 68          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A397EZF3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZF3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.800e-20
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            MAGT VDVALYPLDTIKTRLQS  GFLKAGG +GVY GLSAAA GSAPG   F
Sbjct:   11 MAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALF 63          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A418CJR3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CJR3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 7.380e-20
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            MAGT VDVALYPLDTIKTRLQS  GFLKAGG +GVY GLSAAA GSAPG   F
Sbjct:    1 MAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALF 53          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A3R7D5F1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D5F1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.510e-19
Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGG 50
            MAGT VDVALYPLDTIKTRLQS  GFLKAGG +GVY GLSAAA GSAPGG
Sbjct:    4 MAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGG 53          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A484E6U4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6U4_BRELC)

HSP 1 Score: 82.4 bits (202), Expect = 3.520e-19
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            +AGT+VD+AL+PLDTIKTRLQS  GF KAGG RG+Y+GLSAAA GSAPGG  F
Sbjct:   19 VAGTSVDIALFPLDTIKTRLQSAHGFFKAGGFRGIYSGLSAAAAGSAPGGALF 71          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A7S2R0Q8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0Q8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.020e-18
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    2 AGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            AGT+VDV+LYP+DTIKTRLQSP GFLKAGG RGVYNGL AAA+GSAPG   F
Sbjct:   28 AGTSVDVSLYPIDTIKTRLQSPSGFLKAGGFRGVYNGLGAAALGSAPGAALF 79          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A7S4AEQ2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEQ2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.370e-18
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            MAGT+VDVAL+P+DT+KTR+QSP GF+KAGG RG+YNGL AAAVGSAPG   F
Sbjct:   30 MAGTSVDVALFPIDTLKTRMQSPQGFVKAGGFRGIYNGLGAAAVGSAPGAALF 82          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.470e-18
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            +AGT+VDVAL+PLDTIKTRLQS  GF+KAGG +GVYNGLSAAAVGSAPG   F
Sbjct:   16 IAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAF 68          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A397DY10_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DY10_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.560e-18
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            MAGT VDVALYPLDTIKTRLQS  GFLKAGG +GVY GLSAAA GSAPG   F
Sbjct:    4 MAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALF 56          
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Match: A0A2P4XSQ8_9STRA (Mitochondrial substrate carrier (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSQ8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.130e-18
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGGVCF 53
            +AGT+VD+AL+PLDTIKTRLQS  GF KAGG RGVY+GLSAAA GSAPGG  F
Sbjct:   23 VAGTSVDIALFPLDTIKTRLQSAHGFFKAGGFRGVYSGLSAAAAGSAPGGALF 75          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11940.1215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT9_ECTSI1.610e-2188.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A397EZF3_9STRA6.800e-2081.13Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418CJR3_9STRA7.380e-2081.13Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A3R7D5F1_9STRA2.510e-1986.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A484E6U4_BRELC3.520e-1975.47Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2R0Q8_9STRA1.020e-1880.77Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4AEQ2_9STRA1.370e-1875.47Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A835YJ97_9STRA1.470e-1879.25Mitochondrial carrier domain-containing protein n=... [more]
A0A397DY10_9STRA1.560e-1881.13Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A2P4XSQ8_9STRA2.130e-1877.36Mitochondrial substrate carrier (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..53
e-value: 2.2E-8
score: 35.1
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 2..52
NoneNo IPR availablePANTHERPTHR45667FAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availablePANTHERPTHR45667:SF9S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEINcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11940contigS-dermatodea_contig11940:857..1015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11940.1215.1mRNA_S-dermatodea_contig11940.1215.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11940 857..1024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11940.1215.1 ID=prot_S-dermatodea_contig11940.1215.1|Name=mRNA_S-dermatodea_contig11940.1215.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=53bp
MAGTAVDVALYPLDTIKTRLQSPLGFLKAGGLRGVYNGLSAAAVGSAPGG
VCF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf