prot_S-dermatodea_contig11892.1192.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11892.1192.1
Unique Nameprot_S-dermatodea_contig11892.1192.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length588
Homology
BLAST of mRNA_S-dermatodea_contig11892.1192.1 vs. uniprot
Match: A0A6H5KG19_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG19_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 4.420e-67
Identity = 226/532 (42.48%), Postives = 286/532 (53.76%), Query Frame = 0
Query:   75 AKVWND--SFALGAGFAAQRAIAAKSKAXXXXXXXXXXXXXXXXXXXXXXXXEGAMVAAGRPYMSRAELAAEESKAMARLRGEMEFWREEASTARDEATAAKIRLDAQEEHVEAVLRETAEVLPAYRYGVDLTSNGRRAMTGP-------RLCVLEHRRELEKTAIVRRLKGQVSRLTERLAVAEEELVHLKRSCHFTALTEMLATGEEYVNEVHMLRAKLGNDQAPGNVPTDAVQCDPRP---RAVDIPAA---PQPSKPQSQAAEETTGIVDVLSHIESPKG-----DRSVPSPLAEENAFRRNQHPRPCPGDTAHPPSRTSKLDRASTPHEQPCADVAHSKFDAPANSNRYFKHSGSSNQHATRRYRLAAAFEHSGGRPCEGSRGIGAARARARAGLLGVRHLAGGAGGQGGFTIDGPMRGDASAAVGGGHGAVRLVRGVKNGGVLG---GGRAEMPSEMEMDVMKGLVLAQHQRIERQRAKMRELEHDLRDYRRGALGGGEWPQARWAVSASAQPSSPEWNIGLTPSR 583
            A+ W+D  + AL    +++RA+AAK  A  XXXXXXXX                    AGRPYMSR ELAAE SK +A+LR E+E                + RL+ QEE+V  VL ++AE+LP YRYG+DLT NG     GP       +L +LEHRRELEK+ +VRRL+ Q+SR+TERLA  EEEL+ LKRSC FTAL EML  GEEYV+EV  LRAKL ++   G+  + A    P P   R VDIP+A   P+P  PQ   A  +    + +S+  SP       D+   S L+ + A     +PR    D      R  K        +Q      H +   P +       + +S Q +  R R  A     GGR  + + G     +RA+AGLLGV  LA G G +G   IDGP+      A G   G  R  RGV   G  G   GGR  + +EME+DVMKGLVLAQHQRIE+QR +M+ELE  LRDYRR  + GGEWP   W      Q +SP W  GLTPSR
Sbjct:   15 ARDWDDRGALALAPTASSRRAVAAKLAASAXXXXXXXXRAAGTWESPDRERARRGAAGAGRPYMSRVELAAEGSKELAQLRKEVEHXXXXXXXXXXXXXXXRKRLEHQEENVAGVLHQSAEMLPTYRYGLDLTGNGS-VKNGPSRGPPQRQLAILEHRRELEKSLVVRRLREQLSRVTERLAHTEEELLRLKRSCQFTALAEMLTAGEEYVSEVERLRAKL-DENLNGSGVSPARAAGPVPFMSRVVDIPSAVTAPKPKTPQKWGATRSEKEEEPVSNG-SPSAATDPTDKEDCS-LSSDGAMSIRHNPRQKGADREQSRQRPHKPRHPDDLQQQQHQLQQHRQQGYPQSPQ-----TATSPQGSAVRDRKDAR----GGRQRQRN-GEVFVSSRAKAGLLGV--LAPG-GSRGFMKIDGPI------ATGSSLGRDRAKRGVDARGASGTEKGGRVGLTTEMEVDVMKGLVLAQHQRIEKQRTRMQELERSLRDYRRATVIGGEWPPPPWL----RQLNSPAWKGGLTPSR 519          
BLAST of mRNA_S-dermatodea_contig11892.1192.1 vs. uniprot
Match: D7G7G6_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G6_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.750e-28
Identity = 152/423 (35.93%), Postives = 189/423 (44.68%), Query Frame = 0
Query:  191 TAEVLPAYRYGVDLTSNGRRAMTGP--------RLCVLEHRRELEKTAIVRRLKGQVSRLTERLAVAEEELVHLKRSCHFTALTEMLATGEEYVNEVHMLRAKLG-NDQAPGNVPTDAVQCDPRP---RAVDIPAAPQPSKPQSQAAEETTGIVDVLSHIESPKGDRSVPSPLAEENAFRRNQHPRPCPGDTAHPPSRTSKLDRASTPHEQPCADVAHSKFDAPANSNRYFKHSGSSNQHATRRYRLAAAFEHSGGRPCEGSRGIGAAR---------ARARAGLLGVRHLAGGAGGQGGFTIDGPMRGDASAAVGGGHGAVRLVR-GVKNGGVLG---GGRAEMPSEMEMDVMKGLVLAQHQRIERQRAKMRELEHDLRDYRRGALGGGEWPQARWAVSASAQPSSPEWNIGLTPSRWAGRG 588
            +AE+LP YRYG+DLT NG  A  GP        +L +LEHRRELEK+ +V RL+ QV RL                                        RAKL  N    G  P  A  C P P   R VDIP+A    KP++     TT        I +     +V     EE +            D A       + + A   H +       +  D P   ++  +H     Q   +  + A + + S  R  E +RG G  R         +RA+AGLLGV  LA G G +G   IDGP+      A G   G  R  R GV   G  G   GGR  + +EME+DVMKGLVLAQHQRIERQR +M+ELE DLRDYRR  + GGEWP   W      Q + P W  GLTPSR A  G
Sbjct:   47 SAEMLPTYRYGLDLTGNGS-AKNGPSRGPPQRQQLAILEHRRELEKSLVVCRLREQVERL----------------------------------------RAKLDENPNGSGTSPARAA-C-PAPFMSRVVDIPSAVTALKPKTSHKRGTTRPEKEEEPIRNGSPSVAVYPADKEECSLS---------SDGAMSTRHNPRQEDAGRDHSRQRPHNPRNPDDLPQQQHQLQQHQ---QQGYPQSPQTATSPQESAVRDREDARG-GRQRQRKGEVLVSSRAKAGLLGV--LAPG-GSRGYMKIDGPI------ATGSSLGRDRAKRVGVDARGASGAEKGGRVGLTTEMEVDVMKGLVLAQHQRIERQRTRMQELERDLRDYRRATVLGGEWPPPPWL----RQLNLPAWKGGLTPSRSAPAG 400          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11892.1192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG19_9PHAE4.420e-6742.48WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G7G6_ECTSI3.750e-2835.93WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..169
NoneNo IPR availableCOILSCoilCoilcoord: 232..259
NoneNo IPR availableCOILSCoilCoilcoord: 523..550

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11892contigS-dermatodea_contig11892:1027..5764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11892.1192.1mRNA_S-dermatodea_contig11892.1192.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11892 1027..5764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11892.1192.1 ID=prot_S-dermatodea_contig11892.1192.1|Name=mRNA_S-dermatodea_contig11892.1192.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=588bp
RSRPASAQPSSRAPATPTPTPSRRLEYHSQNLTPPCDDNSSWGGSCGSEG
GGGRRTQKEVRTSAGRGTRASAAVAKVWNDSFALGAGFAAQRAIAAKSKA
AVAASDAAARHGGRAAANVGQAAGEGAMVAAGRPYMSRAELAAEESKAMA
RLRGEMEFWREEASTARDEATAAKIRLDAQEEHVEAVLRETAEVLPAYRY
GVDLTSNGRRAMTGPRLCVLEHRRELEKTAIVRRLKGQVSRLTERLAVAE
EELVHLKRSCHFTALTEMLATGEEYVNEVHMLRAKLGNDQAPGNVPTDAV
QCDPRPRAVDIPAAPQPSKPQSQAAEETTGIVDVLSHIESPKGDRSVPSP
LAEENAFRRNQHPRPCPGDTAHPPSRTSKLDRASTPHEQPCADVAHSKFD
APANSNRYFKHSGSSNQHATRRYRLAAAFEHSGGRPCEGSRGIGAARARA
RAGLLGVRHLAGGAGGQGGFTIDGPMRGDASAAVGGGHGAVRLVRGVKNG
GVLGGGRAEMPSEMEMDVMKGLVLAQHQRIERQRAKMRELEHDLRDYRRG
ALGGGEWPQARWAVSASAQPSSPEWNIGLTPSRWAGRG
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