prot_S-dermatodea_contig11861.1165.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11861.1165.1
Unique Nameprot_S-dermatodea_contig11861.1165.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length175
Homology
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BLAST of mRNA_S-dermatodea_contig11861.1165.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.830e-16
Identity = 75/193 (38.86%), Postives = 96/193 (49.74%), Query Frame = 0 
Query:    1 RHVSYRFPGVELEAAAALFSILQSESSRGSAKXXXXXXXXXXXXXG--------YGAAAPPVFAHEPMPMSALVAATKSLRKLASNVIVFESSRPLMR---------WARGGAGGG-GFGAPSMVRLVRYLSRQCDRFRGKTTHSIVERNLDALMSTLRNCPGGMSTVTAAAAAFQSLRAVSGKSIEEDRFVR 175
            RH+  RF G ELEAAAAL SIL +ESS   AK             G                     +P+S LVAA +SLR L+++ +  E S  +             RG      G G PS  RLVRYL+R+CD+ RG T+H +VERNLDALMS LR+   G+ +  AAA    S  AVS   + + + VR
Sbjct:  101 RHL-VRFVGAELEAAAALLSILATESSARCAKAMAAKVAYEMAQAGGXXXXXXXXXXXXXXXXXXXXLPLSVLVAAVRSLRTLSASAVAIEKSVRISSACPTXXXXXXXRGPVSVRLGPGGPSASRLVRYLTRECDKVRGITSHPVVERNLDALMSELRSWSAGLGS--AAAGGRFSAPAVSTGEVFQSKGVR 290
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11861.1165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1S2_9PHAE2.830e-1638.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11861contigS-dermatodea_contig11861:4443..6754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11861.1165.1mRNA_S-dermatodea_contig11861.1165.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11861 4443..6754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11861.1165.1 ID=prot_S-dermatodea_contig11861.1165.1|Name=mRNA_S-dermatodea_contig11861.1165.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=175bp
RHVSYRFPGVELEAAAALFSILQSESSRGSAKAAAAAAAAGATAGGYGAA
APPVFAHEPMPMSALVAATKSLRKLASNVIVFESSRPLMRWARGGAGGGG
FGAPSMVRLVRYLSRQCDRFRGKTTHSIVERNLDALMSTLRNCPGGMSTV
TAAAAAFQSLRAVSGKSIEEDRFVR
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