prot_S-dermatodea_contig11850.1158.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11850.1158.1
Unique Nameprot_S-dermatodea_contig11850.1158.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length111
Homology
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BLAST of mRNA_S-dermatodea_contig11850.1158.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 4.960e-11
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0 
Query:    1 MRPEAALELLRGSVARSGGLIHPLATPTDPVCRCVRLLCRRAPAFAIPAVAAPDDSASGTDDVSG 65
            +RPE+ALELLRG V RSGG++H L  P D  CR VRLLCRRAP + +P      DS  GT  V+G
Sbjct:  362 LRPESALELLRGCVVRSGGVVHFLHAPADAACRGVRLLCRRAPEYVVPL---STDSPPGTTPVTG 423
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11850.1158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGW6_9PHAE4.960e-1156.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11850contigS-dermatodea_contig11850:5366..5698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11850.1158.1mRNA_S-dermatodea_contig11850.1158.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11850 5366..5698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11850.1158.1 ID=prot_S-dermatodea_contig11850.1158.1|Name=mRNA_S-dermatodea_contig11850.1158.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=111bp
MRPEAALELLRGSVARSGGLIHPLATPTDPVCRCVRLLCRRAPAFAIPAV
AAPDDSASGTDDVSGKKRSKDKSSGSRRPRDAGGRESRGGGGGGYARRQA
KGGERRDVETR
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