prot_S-dermatodea_contig11837.1152.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11837.1152.1
Unique Nameprot_S-dermatodea_contig11837.1152.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length771
Homology
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BLAST of mRNA_S-dermatodea_contig11837.1152.1 vs. uniprot
Match: D7FGZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ3_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 4.590e-53
Identity = 126/213 (59.15%), Postives = 154/213 (72.30%), Query Frame = 0 
Query:    1 MSFFVDELEDQRKELEARRLVLEERYKLRLATAQEFGVIHTRRLGRIREAFETQCNVAQRRNQAVVQRVRQSQSTFFGEGVHRDASVSRTRLSYQTERFLSTAHKLYPAWQGQQLYRKATELRNLEEERFVTEQRRRSARDNFEQEQVLQAAVEXXXXXLAAARAHERNELALWRAQRERATAQGHQALLEILEREDDAARTARRRVLAEVTN 213
            M   VDELE QR+ELEARR +LEER+KLRLATAQEFG+IHT+RLGR+REAF  QC  A+RRNQ+++ + +QS   F  E     + +S  RLS+QTERFLS A KLYPAWQ +QL+RK  +L  +EEERFVTEQRRR+ARD FEQEQ L A +      LAAARAHERNE A+ + +R R+TA   QAL   LER ++A R AR   LA  +N
Sbjct:    1 MMMCVDELESQRRELEARRAMLEERFKLRLATAQEFGMIHTQRLGRVREAFVAQCGAARRRNQSILDKAKQSNDAFSHERAL--SGLSHKRLSHQTERFLSVADKLYPAWQEEQLHRKTRQLATIEEERFVTEQRRRAARDRFEQEQALAAVIAEGQRRLAAARAHERNESAVRQVRRGRSTAADGQALNAELERVNEAGRNARYDALAGGSN 211
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BLAST of mRNA_S-dermatodea_contig11837.1152.1 vs. uniprot
Match: A0A6H5KG08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG08_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.040e-29
Identity = 102/220 (46.36%), Postives = 126/220 (57.27%), Query Frame = 0 
Query:  554 PHLSLPAASRALVALTLQIETLAS--QASEAAEGRGEQAPSSPAPIVLDGYGSVDAAPSGD----RNAATARATAAAPGEDR-------DRIGEFSLSTLCGAVLDLITARAGDIIPAEVLSGRVSVATVRAQHRRKGP--PGRVQLFDAFVSHARRVVAWGEIG-----PDAVAGVFAPCFELVVA-------RVRGXXXXXXXXXLRRKMFALLQSAA 746
            P LSLP A+RA+ ALT QIE LA+   A+   +G G  +  SP   VLD YGSV    SG     R AA   A AA P +D          +  F ++ LC AVLDLITA + +I+PAE LSG V+ A VRA+HRR G   PGR+QLFDA  SHARR+ +  ++G       A+AGVFAPCFE   +       RV G         LRRK+FA L+SAA
Sbjct:  606 PRLSLPEAARAVTALTAQIENLAAILAAAPYGDGPGPSSSLSPCRRVLDAYGSVAMVRSGGAKAARAAAAVTAVAATPVDDTAASTSPLPELAAFGMADLCAAVLDLITAHSAEILPAEALSGIVTAAKVRAEHRRGGKAHPGRLQLFDAVTSHARRLASGKDLGGVDHSTTAIAGVFAPCFEAAFSSSTARGNRVAGSGGASER--LRRKVFAFLESAA 823
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11837.1152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGZ3_ECTSI4.590e-5359.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG08_9PHAE1.040e-2946.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableCOILSCoilCoilcoord: 122..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11837contigS-dermatodea_contig11837:1064..6052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11837.1152.1mRNA_S-dermatodea_contig11837.1152.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11837 1064..6052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11837.1152.1 ID=prot_S-dermatodea_contig11837.1152.1|Name=mRNA_S-dermatodea_contig11837.1152.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=771bp
MSFFVDELEDQRKELEARRLVLEERYKLRLATAQEFGVIHTRRLGRIREA
FETQCNVAQRRNQAVVQRVRQSQSTFFGEGVHRDASVSRTRLSYQTERFL
STAHKLYPAWQGQQLYRKATELRNLEEERFVTEQRRRSARDNFEQEQVLQ
AAVEERRRRLAAARAHERNELALWRAQRERATAQGHQALLEILEREDDAA
RTARRRVLAEVTNHHHNSDRTDLASEYGGAGTGRCGDAPSDEESSPETSI
WCLDGKARRGVASSDKGRVGKRREERRDTGKVAGERGCRAELLEEHGVHR
PRERNELDDPGEPEQEGGIGADLDARARNGPYESPPIVRTTRDETAVAST
TGMPTSIPVTRHQSNKQLLEPPPSSQAHHSGDRPHTHSADVIVAEQGTPE
PLSPPQAASLGRKARGGSFSSSERSAPLTDNNTLPNSRAVYRKNSDHARG
GNEGVLEVGLADDGCATTEEAEAAAAAKRISSGSEDQLQQADRRSLPHAE
TRREGEKPINAGVGPHGEIEAAEVDADSTTHGHLSESERSAEAGRPTSPE
DARPHLSLPAASRALVALTLQIETLASQASEAAEGRGEQAPSSPAPIVLD
GYGSVDAAPSGDRNAATARATAAAPGEDRDRIGEFSLSTLCGAVLDLITA
RAGDIIPAEVLSGRVSVATVRAQHRRKGPPGRVQLFDAFVSHARRVVAWG
EIGPDAVAGVFAPCFELVVARVRGGGGGGGAERLRRKMFALLQSAADADT
PASTNASSTTTPTASARLTPS
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