prot_S-dermatodea_contig11773.1125.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11773.1125.1
Unique Nameprot_S-dermatodea_contig11773.1125.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length106
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig11773.1125.1 vs. uniprot
Match: D8LGF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF7_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 4.380e-24
Identity = 60/100 (60.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:    5 ITEIPGGSRRCLSLPMPRLRVRPEGKSAGQD--ELRSPLALRPLFQWEKSLIKHLQRHLSLRWSTSAGEAAAATGTPAASPGGALVDDSGVAGTRGNGGG 102
            + EIP GSRRCLSL +PRLRVRPEG+S+G+D  E RSPL+LRPLF WEKSL  H+   LSLRWST+  EA AA     AS GG + D     GT   GGG
Sbjct:  632 VVEIPRGSRRCLSLRVPRLRVRPEGRSSGRDGDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAASLGTASGGGVVPDPFTGEGTASAGGG 731
[Close]
BLAST of mRNA_S-dermatodea_contig11773.1125.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.910e-23
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0 
Query:    5 ITEIPGGSRRCLSLPMPRLRVRPEGKSAG--QDELRSPLALRPLFQWEKSLIKHLQRHLSLRWSTSAGEAAAATGTPAASPGGAL 87
            + EIPGGSRRCLSL +PRLRVRPEG+S G  +DE RSPL+LRPLF WEKSL  H+   LSLRWST+  EA AA     A+ GG +
Sbjct: 1381 VVEIPGGSRRCLSLRVPRLRVRPEGRSLGRDEDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAASLGTAAGGGVV 1465
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11773.1125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF7_ECTSI4.380e-2460.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9H9_9PHAE2.910e-2363.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11773contigS-dermatodea_contig11773:2666..4278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11773.1125.1mRNA_S-dermatodea_contig11773.1125.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11773 2666..4280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11773.1125.1 ID=prot_S-dermatodea_contig11773.1125.1|Name=mRNA_S-dermatodea_contig11773.1125.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bp
GGSGITEIPGGSRRCLSLPMPRLRVRPEGKSAGQDELRSPLALRPLFQWE
KSLIKHLQRHLSLRWSTSAGEAAAATGTPAASPGGALVDDSGVAGTRGNG
GGLWPS
back to top