prot_S-dermatodea_contig1177.1116.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1177.1116.1
Unique Nameprot_S-dermatodea_contig1177.1116.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length300
Homology
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BLAST of mRNA_S-dermatodea_contig1177.1116.1 vs. uniprot
Match: A0A6H5K3N2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3N2_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 2.920e-102
Identity = 196/325 (60.31%), Postives = 217/325 (66.77%), Query Frame = 0 
Query:    1 MNAASARGGNGHVVFESTRIAEELARGGVPPGSIIADYASWDTVGNAWFARMAVEAILDMSFRHGDTPDEPHPAPPP----PSAVLRP----PRKLPFPGSALKGD-GTDVEGEVKTKS--GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------------EKLPAARKGEAYGGGEIRKWMFDWKAKKARARRGPLNVTVFVSDFHAERMDAVFQWVFGLEPSLLEGKATVTTVSIDTPVEMWARGPGQRQARQAHEREAADQARLHAKEIRTVDEFRAFMMLGGHQGYFNLTHGRYQASAGGGWGGAS 299
            MNA SARGGNGHV+FESTRIAEEL R                         MAVEA+LDMSFRHGD  +E H APP     P+A + P    PRKLP+PGSA+  + G   EGE +T +  GG                               XXXXXX                EKLPAAR GEAYGGGE+RKWM+DWK KKARARRGP+N+TVFVSDFHAERMDAVFQWVFGLEPSLL GK TVTTVSI+TPVEMWARG  QR+ARQAHEREAA+QAR  A+EIRTV+EFRAFMMLGGH+GYF+LTHGRYQAS GGGWGGAS
Sbjct:  123 MNAPSARGGNGHVIFESTRIAEELVR-------------------------MAVEAMLDMSFRHGDRANE-HAAPPXXXXAPAAGVAPSVLSPRKLPYPGSAVVTESGGTGEGESETAAALGGVEEPGLFSARREAAAAAARGLTLKETKRADAXXXXXXXXXXXXXXXXXRKGGGEKLPAARAGEAYGGGEMRKWMYDWKNKKARARRGPMNLTVFVSDFHAERMDAVFQWVFGLEPSLLRGKTTVTTVSIETPVEMWARGGEQREARQAHEREAAEQARQRAREIRTVEEFRAFMMLGGHRGYFDLTHGRYQASPGGGWGGAS 421
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1177.1116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K3N2_9PHAE2.920e-10260.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1177contigS-dermatodea_contig1177:2266..3925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1177.1116.1mRNA_S-dermatodea_contig1177.1116.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1177 2266..4882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1177.1116.1 ID=prot_S-dermatodea_contig1177.1116.1|Name=mRNA_S-dermatodea_contig1177.1116.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=300bp
MNAASARGGNGHVVFESTRIAEELARGGVPPGSIIADYASWDTVGNAWFA
RMAVEAILDMSFRHGDTPDEPHPAPPPPSAVLRPPRKLPFPGSALKGDGT
DVEGEVKTKSGGSGGGDDDAKRDDDERGVLIEGGMTEEEVKKAVDERHEE
EKLPAARKGEAYGGGEIRKWMFDWKAKKARARRGPLNVTVFVSDFHAERM
DAVFQWVFGLEPSLLEGKATVTTVSIDTPVEMWARGPGQRQARQAHEREA
ADQARLHAKEIRTVDEFRAFMMLGGHQGYFNLTHGRYQASAGGGWGGAS*
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