prot_S-dermatodea_contig11735.1102.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11735.1102.1
Unique Nameprot_S-dermatodea_contig11735.1102.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length134
Homology
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: D7G7Q4_ECTSI (Dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q4_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.120e-35
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 MSSEGLLEDPSLFDRELTPMSQLQGVEVAHRILSLAAEYMELAGRFPTPMVSIKGHLFKMLYRLLDFHHDLRDRLAYYEADQAEADAVVREMCRRY 96
            MSSEGLLE+P+LFD +L PM +LQG+EVAHRILS   EYMEL  R+P PM+SIKGHLFKMLYRLL+ HHDLR RL +Y+ D  EAD +V E  R +
Sbjct:  309 MSSEGLLENPALFDSDLIPMEELQGLEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTH 404          
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: A0A6H5JD10_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD10_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.040e-26
Identity = 62/129 (48.06%), Postives = 75/129 (58.14%), Query Frame = 0
Query:    1 MSSEGLLEDPSLFDRELTPMSQLQGVEV---------------------------------AHRILSLAAEYMELAGRFPTPMVSIKGHLFKMLYRLLDFHHDLRDRLAYYEADQAEADAVVREMCRRY 96
            MSSEGLLE+P+LFDR+L P+ +LQGVEV                                 AHRILS   EYMEL   +P PM+SIKGHLFKMLYRLL+ HHDLR RL +Y  D  EAD ++    R++
Sbjct:  309 MSSEGLLENPALFDRDLIPIEELQGVEVRRVSSFSCYSARRTPRMFFTCLTINAGLPGPQVAHRILSFTTEYMELVKLYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYHCDAMEADVIMWIDARKF 437          
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: W7TKF8_9STRA (Dihydrouridine synthase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-12
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MSSEGLLEDPSLF------------DRELTPMSQLQGVEVAHRILSLAAEYMELAGRF--PTPMVSIKGHLFKMLYRLLDF--HHDLRDRLAYYEADQAEADAVVREMCRRYLFDPDTRMPLEGTPGVPALPISPKRWYRRH 126
            MSSEGLLE+PSLF             R  +   +++   +AHR L+ A EY+ELA +F     + ++KGHLFKMLY +L+   ++DLR++L        + + VV+E+        D  + L  T G    P+S   WYRRH
Sbjct:  346 MSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVL--TKGAIVSPVS---WYRRH 482          
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: A0A7S0PHH6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHH6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.080e-11
Identity = 49/139 (35.25%), Postives = 68/139 (48.92%), Query Frame = 0
Query:    1 MSSEGLLEDPSLFDRELTPMSQLQGVEVAHRILSLAAEYMELAGRFPTPM----------VSIKGHLFKMLYRLLDFHHDLRDRLA---YYEADQAEADAVVREMCRRYLFDPDTRMPLEGTPGVPALPISPKRWYRRH 126
            MSSE LLE+P++F        +L G E+  R   LA EY+ LA   P P+           ++KGHLFK+LYR LD H DLRD+L     Y  DQ+ +  ++R++  R+    D  +                 WYRRH
Sbjct:  270 MSSEALLENPAIFRDGEKDDLELSGRELVDRQFKLAEEYLALARECP-PLKGSLGENGGHATVKGHLFKILYRFLDHHVDLRDKLGDSKCYHIDQSSS--IIRQLKDRFDIIDDDELEFSIW----------SSWYRRH 395          
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: A0A7S2C8F7_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8F7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.980e-11
Identity = 54/161 (33.54%), Postives = 71/161 (44.10%), Query Frame = 0
Query:    1 MSSEGLLEDPSLFDRELTPMSQLQGVE-----------------------VAHRILSLAAEYMELAGRFPTPMV--SIKGHLFKMLYRLLDFHHDLRDRLAYYEADQAEADAVVREMCRRYLFDPDTRMPLEGTPGV----------PALPISPKRWYRRH 126
            MSSE LLE+P LF +       L G E                       VA R LS   EY+ L+  FP   V  + KGH FKMLYRLL+ H D+R+RL     + A+   +   +  RY      R+P+E +P              L ++ K WYRRH
Sbjct:  285 MSSEALLENPGLFQQNTDHSQDLVGSEGGALNGGTSRSEMDYSEWCEAQLVAARQLSYMREYIALSTLFPARDVIGTTKGHAFKMLYRLLEVHTDVRERLVRMR-NLADLSDITDTLAARY------RLPVEASPDELRGFRCDDQSTPLHVAAKTWYRRH 438          
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Match: A0A7S1VKR7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKR7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.010e-6
Identity = 48/136 (35.29%), Postives = 66/136 (48.53%), Query Frame = 0
Query:    1 MSSEGLLEDPSLFDRELTPMSQLQGVEVAHRILSLAAEYMELAGRFPT-PMVS------IKGHLFKMLYRLLDFHHDLRDRLAYYEADQ--AEADAVVREMCRRYLFDPDTRMPLEGTPGVPALPISPKRWYRRHW 127
            MSSE LLE P++F    TP+ + +  ++  + L  A +Y++L   FP  P VS      IK HLFKML+R +  HHDLR  LA +        A  +V ++  RY  D      L       A       +YRRHW
Sbjct:  329 MSSEALLERPNIFT---TPILEDRR-QIFEQQLGFARDYLDLCQSFPPLPGVSVSSFSVIKSHLFKMLHRYIQQHHDLRITLAKHGKTHQLVHAYEIVDQLEERYESD----QALLQCSSCDAN----SSYYRRHW 452          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11735.1102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G7Q4_ECTSI1.120e-3566.67Dihydrouridine synthase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD10_9PHAE1.040e-2648.06Reverse transcriptase domain-containing protein n=... [more]
W7TKF8_9STRA1.300e-1236.62Dihydrouridine synthase n=2 Tax=Nannochloropsis ga... [more]
A0A7S0PHH6_9STRA5.080e-1135.25Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2C8F7_9STRA6.980e-1133.54Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
A0A7S1VKR7_9STRA5.010e-635.29Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11082:SF5TRNA-DIHYDROURIDINE(16/17) SYNTHASE [NAD(P)(+)]-LIKEcoord: 1..95
NoneNo IPR availablePANTHERPTHR11082TRNA-DIHYDROURIDINE SYNTHASEcoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11735contigS-dermatodea_contig11735:4935..6442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11735.1102.1mRNA_S-dermatodea_contig11735.1102.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11735 4483..6619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11735.1102.1 ID=prot_S-dermatodea_contig11735.1102.1|Name=mRNA_S-dermatodea_contig11735.1102.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=134bp
MSSEGLLEDPSLFDRELTPMSQLQGVEVAHRILSLAAEYMELAGRFPTPM
VSIKGHLFKMLYRLLDFHHDLRDRLAYYEADQAEADAVVREMCRRYLFDP
DTRMPLEGTPGVPALPISPKRWYRRHWPEQREA*
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