prot_S-dermatodea_contig11690.1075.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11690.1075.1
Unique Nameprot_S-dermatodea_contig11690.1075.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length90
Homology
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 7.710e-45
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            MIVGANGCGKTT+IECLKYACTGALPPGARNGQ+FVHDPK  VSGTNEVKANIKLRF+ RD  V VVIRSF+LTQK+ TLQFKALDGVIR
Sbjct:   31 MIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPK--VSGTNEVKANIKLRFSARDKTVGVVIRSFQLTQKRKTLQFKALDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: H3GA74_PHYRM (AAA_23 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA74_PHYRM)

HSP 1 Score: 123 bits (309), Expect = 2.180e-33
Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +++G NGCGKTTVIECLK ACTG LPPGAR+GQ+ +HDPK  ++GTNEVKA+I+LRF  R G+  VV R++++ Q K  L FKALDGVIR
Sbjct:   31 VLLGDNGCGKTTVIECLKLACTGGLPPGARSGQSLIHDPK--IAGTNEVKASIRLRFRNRAGKAMVVQRTYQVRQTKKNLVFKALDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A835YS38_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS38_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.000e-33
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            MIVG+NGCGKTT+IECL+YA TG LPP +RNGQ FVHDPK  +S T EVKA IKLR         VV+RS +LTQKK T+QFKALDGV++
Sbjct:   31 MIVGSNGCGKTTIIECLRYATTGILPPNSRNGQTFVHDPK--MSNTTEVKAQIKLRLQRGVDMPIVVVRSLQLTQKKTTMQFKALDGVLK 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A2P4XQ47_9STRA (DNA repair protein RAD50 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ47_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.750e-32
Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +++G NGCGKTTVIECLK ACTG LPPGAR+G + +HDPK  ++GTNEVKA+I+LRF  R G+  VV R++++ Q K  LQFKALDGVIR
Sbjct:   31 VLLGDNGCGKTTVIECLKLACTGGLPPGARSGHSLIHDPK--IAGTNEVKASIRLRFRNRAGKAMVVNRTYQVRQTKKALQFKALDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A662WHK9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHK9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.530e-32
Identity = 59/90 (65.56%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +I+G NGCGKTTVIECLK AC+G+LPPGAR+GQ+FVHDPK  ++GTNEVKA+++LRF  R G+  VV R++++ Q K ++QFKALDGVIR
Sbjct:   31 VILGDNGCGKTTVIECLKVACSGSLPPGARSGQSFVHDPK--IAGTNEVKASVRLRFRNRAGKAMVVQRTYQVRQLKASVQFKALDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A7S4KCM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCM0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.370e-32
Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +IVG NGCGKTT+IE L+YA  G LPPG R+GQAFVHDPK++  G   VKANIKLRF  R G   VV+RS +LTQKK T+QFKALDG++R
Sbjct:   32 VIVGNNGCGKTTIIESLRYAVAGTLPPGTRSGQAFVHDPKSA--GQTSVKANIKLRFNNRAGNSMVVVRSMELTQKKTTMQFKALDGILR 119          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: G4YI53_PHYSP (AAA_23 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YI53_PHYSP)

HSP 1 Score: 126 bits (316), Expect = 8.790e-32
Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +++G NGCGKTTVIECLK ACTG LPPGAR+GQ+ VHDPK  ++GTNEVKA+++LRF  R G+  VV RSF++ Q K  L FKALDGVIR
Sbjct:   60 VLLGDNGCGKTTVIECLKLACTGGLPPGARSGQSLVHDPK--IAGTNEVKASVRLRFRNRAGKAMVVQRSFQVRQTKKNLTFKALDGVIR 147          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: K3WA27_GLOUD (AAA_23 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA27_GLOUD)

HSP 1 Score: 125 bits (315), Expect = 1.200e-31
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +I+G NGCGKTT+IECLK +CTG+LPPGAR GQ+FVHDPK  ++GTNEVKA+I+LRF    G+  VV R+++L Q K  LQFKA+DGVIR
Sbjct:   31 VILGDNGCGKTTIIECLKISCTGSLPPGARGGQSFVHDPK--IAGTNEVKASIRLRFRNCAGKAMVVQRTYQLLQTKAKLQFKAMDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A5D6XIH6_9STRA (AAA_23 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIH6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.200e-31
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +I+G NGCGKTT+IECLK  CTGALPPGAR GQ+FVHDPK  ++GTNEVKA+I+LRF    G+  VV R+++LTQ +  L+FKA+DGVIR
Sbjct:   31 VILGDNGCGKTTIIECLKIVCTGALPPGARGGQSFVHDPK--IAGTNEVKASIRLRFRNSAGKAMVVQRTYQLTQLRSQLRFKAMDGVIR 118          
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Match: A0A6A3XDG6_9STRA (DNA repair protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XDG6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.230e-31
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVKANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR 90
            +++G NGCGKTTVIECLK ACTG LPPGAR+GQ+ VHDPK  ++GTNEVKA+++LRF  R G+  VV RSF++ Q K +L FKALDGV+R
Sbjct:   31 VLLGDNGCGKTTVIECLKLACTGGLPPGARSGQSLVHDPK--IAGTNEVKASVRLRFRNRAGQPMVVQRSFQVRQTKKSLTFKALDGVVR 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11690.1075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G250_ECTSI7.710e-4586.67AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
H3GA74_PHYRM2.180e-3364.44AAA_23 domain-containing protein n=1 Tax=Phytophth... [more]
A0A835YS38_9STRA7.000e-3366.67AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A2P4XQ47_9STRA1.750e-3264.44DNA repair protein RAD50 (Fragment) n=1 Tax=Phytop... [more]
A0A662WHK9_9STRA2.530e-3265.56Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S4KCM0_9STRA3.370e-3266.67Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
G4YI53_PHYSP8.790e-3266.67AAA_23 domain-containing protein n=1 Tax=Phytophth... [more]
K3WA27_GLOUD1.200e-3165.56AAA_23 domain-containing protein n=1 Tax=Globispor... [more]
A0A5D6XIH6_9STRA1.200e-3165.56AAA_23 domain-containing protein n=1 Tax=Pythium b... [more]
A0A6A3XDG6_9STRA2.230e-3165.56DNA repair protein n=6 Tax=Phytophthora TaxID=4783... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038729Rad50/SbcC-type AAA domainPFAMPF13476AAA_23coord: 2..86
e-value: 7.6E-15
score: 55.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..88
e-value: 3.9E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR18867RAD50coord: 1..89
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11690contigS-dermatodea_contig11690:156..2431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11690.1075.1mRNA_S-dermatodea_contig11690.1075.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11690 156..2461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11690.1075.1 ID=prot_S-dermatodea_contig11690.1075.1|Name=mRNA_S-dermatodea_contig11690.1075.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=90bp
MIVGANGCGKTTVIECLKYACTGALPPGARNGQAFVHDPKASVSGTNEVK
ANIKLRFAGRDGRVSVVIRSFKLTQKKVTLQFKALDGVIR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038729Rad50/SbcC_AAA
IPR027417P-loop_NTPase