prot_S-dermatodea_contig11661.1064.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11661.1064.1
Unique Nameprot_S-dermatodea_contig11661.1064.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length191
Homology
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: A0A6H5KU96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU96_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 4.280e-46
Identity = 130/207 (62.80%), Postives = 139/207 (67.15%), Query Frame = 0
Query:    2 SKEAEEFTVDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERWDAS---------SSPXXXXXXXXXXXXXXXXXXXXXXXXX--------TAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKSKVGKDKDSP 191
            S   +EF VDY LY+SFWRLQEY L+QD  VKG+GAK TW+A+L DVDK LGAFEAN+FSEHDLRLARE+W A          SSP XXXXXXXXXXXXXXXXXXXXXXXX         AEA   P                    G          VYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLK+KV   KDSP
Sbjct:   56 SANPQEFAVDYPLYRSFWRLQEYPLQQDKVVKGEGAKATWEALLADVDKTLGAFEANSFSEHDLRLAREKWAADGGGCGGCGLSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAEAAPAPAA----------------RDGAEGETETGGPVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSP 246          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: D7G2N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N9_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 4.900e-44
Identity = 126/193 (65.28%), Postives = 134/193 (69.43%), Query Frame = 0
Query:    1 ESKEAEEFTVDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERW--DASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKSKVGKDKDSP 191
            E    +EF V Y LY+SFWRLQEY L+QD  VKG+  K TW+A+L DVDKILGAFEANAFSEHDLRLARE+W  D     XXXXXXXXXXXXXXXXXXXXXXXXX               AG A A                  VYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLK+KV   KDSP
Sbjct:  337 EGANPQEFAVHYPLYRSFWRLQEYPLQQDKVVKGEETKATWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGAAPAPAPAAREVAEGESEEGGPVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSP 529          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: A0A7S2W205_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W205_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.380e-8
Identity = 56/176 (31.82%), Postives = 70/176 (39.77%), Query Frame = 0
Query:   10 VDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERWDASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXA--GXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKSK 183
            VDY LY+  W LQ +      A+        W +  + V  +L AFE  AF EH+L   R  + +  +                          T    S P   G G             A  G           YFG KYLT+SRLLRLQL DP LRLQV TQ  +L A LK++
Sbjct:  278 VDYELYEHLWGLQRWMASPSLALS---TPAEWASFTETVAHVLRAFEFYAFHEHELEQGRLGYASRRNASLPEHLRGTAPKLAMAPA-------TDALSSDPSTPGGGEPKSMDLDTTPVSARKGASGGGTSDTSPYFGCKYLTTSRLLRLQLVDPQLRLQVTTQLWVLFAHLKAQ 443          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: A0A7S1XRN1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRN1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.550e-6
Identity = 54/169 (31.95%), Postives = 72/169 (42.60%), Query Frame = 0
Query:   10 VDYRLYQSFWRLQEYALKQD--GAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERWDASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLIL 176
            +DY  Y+ FW LQ Y  K +  G   G+   E +   L+  + +L AFE ++FS  D R+A  R++ +                             ++ V  P RG +  AG   +                       KYLTSSRLLRLQLRDP LR QVL Q LIL
Sbjct:  586 LDYGFYKQFWGLQSYFSKAEVNGPAPGEDELEDF---LECAETVLQAFEGHSFSVEDRRMAAARFENARK--------------------------ASQQVMRP-RGASVDAGADASADANGGDEVEVEAADASKANLSCKYLTSSRLLRLQLRDPVLRQQVLLQVLIL 724          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: A0A2R5GJ30_9STRA (THO complex subunit 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ30_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.990e-6
Identity = 54/172 (31.40%), Postives = 71/172 (41.28%), Query Frame = 0
Query:   10 VDYRLYQSFWRLQEYALKQDGAVKGDGAK-ETWKAILDDVDKILGAFEANAFSEHDLRLARERWDASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASL 180
            V+Y LY  FW LQ + + +     G     +TW +  +  + +L AFE+N FS+ D  L RE   A +S                          T E       G  G  G +  G                  +F  KYL+SSRLLRLQL DPTLR  VL Q+ +L  SL
Sbjct:  266 VNYTLYSRFWELQRFFMTRIDRAGGCARDVKTWTSFAEVANVVLTAFESNPFSQAD--LDREALAARASKRRRVSADATMDTAAADGDSAAMQLETEEG----SEGVIGEEGSSARG------------------FFPTKYLSSSRLLRLQLTDPTLRRNVLCQFSVLLNSL 413          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: F0WMF7_9STRA (THO complex subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMF7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.830e-5
Identity = 54/181 (29.83%), Postives = 75/181 (41.44%), Query Frame = 0
Query:   10 VDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERWDASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASL---KSKVGKD 187
            +DY+LY  FW +Q +      A      K+T+   L++++ +L AFEANAFS+ D   + +                                     VS      A +  + +                    +F  KYLT+SRL RLQLRDPTLR  VLTQ LIL + L   KS V +D
Sbjct:  207 IDYKLYHIFWDVQRFFRDYSLAASSVMDKKTF---LEELNMVLTAFEANAFSDEDTTRSSD---------------------------------LNRTVSKSTVSSASKMSIDK------IMHDDNSTDKLQEHFFQPKYLTNSRLFRLQLRDPTLRECVLTQALILLSHLVRAKSTVSQD 345          
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Match: F0WMF0_9STRA (THO complex subunit putative n=7 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMF0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.030e-5
Identity = 54/181 (29.83%), Postives = 75/181 (41.44%), Query Frame = 0
Query:   10 VDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDKILGAFEANAFSEHDLRLARERWDASSSPXXXXXXXXXXXXXXXXXXXXXXXXXTAEAVSTPLRGGAGRAGVARAGCXXXXAGXXXXXXXXXXVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASL---KSKVGKD 187
            +DY+LY  FW +Q +      A      K+T+   L++++ +L AFEANAFS+ D   + +                                     VS      A +  + +                    +F  KYLT+SRL RLQLRDPTLR  VLTQ LIL + L   KS V +D
Sbjct:  213 IDYKLYHIFWDVQRFFRDYSLAASSVMDKKTF---LEELNMVLTAFEANAFSDEDTTRSSD---------------------------------LNRTVSKSTVSSASKMSIDK------IMHDDNSTDKLQEHFFQPKYLTNSRLFRLQLRDPTLRECVLTQALILLSHLVRAKSTVSQD 351          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11661.1064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KU96_9PHAE4.280e-4662.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2N9_ECTSI4.900e-4465.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W205_9STRA9.380e-831.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XRN1_9STRA1.550e-631.95Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2R5GJ30_9STRA1.990e-631.40THO complex subunit 1 n=1 Tax=Hondaea fermentalgia... [more]
F0WMF7_9STRA3.830e-529.83THO complex subunit putative n=1 Tax=Albugo laibac... [more]
F0WMF0_9STRA4.030e-529.83THO complex subunit putative n=7 Tax=Albugo laibac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021861THO complex, subunit THOC1PFAMPF11957efThoc1coord: 144..185
e-value: 4.6E-7
score: 28.9
IPR021861THO complex, subunit THOC1PANTHERPTHR13265THO COMPLEX SUBUNIT 1coord: 2..191
NoneNo IPR availablePANTHERPTHR13265:SF0HPR1coord: 2..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11661contigS-dermatodea_contig11661:600..4296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11661.1064.1mRNA_S-dermatodea_contig11661.1064.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11661 600..4296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11661.1064.1 ID=prot_S-dermatodea_contig11661.1064.1|Name=mRNA_S-dermatodea_contig11661.1064.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=191bp
ESKEAEEFTVDYRLYQSFWRLQEYALKQDGAVKGDGAKETWKAILDDVDK
ILGAFEANAFSEHDLRLARERWDASSSPSSPSSPSLSPSSSSSQSSPAAP
SLPTAEAVSTPLRGGAGRAGVARAGCXXXXAGGGGGGGGGGGVYFGLKYL
TSSRLLRLQLRDPTLRLQVLTQWLILAASLKSKVGKDKDSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021861THO_THOC1