prot_S-dermatodea_contig11444.933.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11444.933.1
Unique Nameprot_S-dermatodea_contig11444.933.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length86
Homology
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BLAST of mRNA_S-dermatodea_contig11444.933.1 vs. uniprot
Match: D7G3Q5_ECTSI (Type I fatty acid synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q5_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.280e-25
Identity = 61/80 (76.25%), Postives = 64/80 (80.00%), Query Frame = 0 
Query:    1 RRGKGFLDGLKADSPRARAWRALSSISTTKVVVLRCDVTVADDVMGAL-SAAGAEASLPPVLGIVHAACPPPKGDSEGEE 79
            RRGKGFL+GLKADSPR RAW ALS+I TTKVVVLRCDVTV  DV  AL +AA AEA LPPV GIVHAACPP  G   GEE
Sbjct: 2271 RRGKGFLEGLKADSPRGRAWSALSAIHTTKVVVLRCDVTVRKDVQTALGTAASAEAGLPPVRGIVHAACPPQAGGG-GEE 2349
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11444.933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3Q5_ECTSI2.280e-2576.25Type I fatty acid synthase, putative n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..71
e-value: 1.6E-5
score: 26.2
IPR013968Polyketide synthase, ketoreductase domainPFAMPF08659KRcoord: 17..68
e-value: 2.8E-5
score: 24.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11444contigS-dermatodea_contig11444:473..1364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11444.933.1mRNA_S-dermatodea_contig11444.933.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11444 473..1366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11444.933.1 ID=prot_S-dermatodea_contig11444.933.1|Name=mRNA_S-dermatodea_contig11444.933.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=86bp
RRGKGFLDGLKADSPRARAWRALSSISTTKVVVLRCDVTVADDVMGALSA
AGAEASLPPVLGIVHAACPPPKGDSEGEEATDAPGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013968PKS_KR