prot_S-dermatodea_contig1142.919.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1142.919.1
Unique Nameprot_S-dermatodea_contig1142.919.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length242
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig1142.919.1 vs. uniprot
Match: D8LIR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR4_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 3.470e-7
Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:   92 TQKAAMSEAKVSIRRLEEGEG-IARDLDIILGELEDELYDFKRGMRKDLEQLAVREKQLSTEMDDLRGNMKGWENNTRGD----QVNADQKAATA 181
            TQKA MS+ K  IR L    G  +  L+ ++  LEDELY+FK  MRK  + L V+EK LS+E+++LRG +K WE   R D    Q  A  + +TA
Sbjct:    2 TQKATMSKIKEDIRHLSVNGGEYSGGLERVMEGLEDELYEFKCAMRKGFDVLVVKEKSLSSEVEELRGKVKEWEKKPRRDVPAMQPTAGSRPSTA 96
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1142.919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIR4_ECTSI3.470e-744.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..166
NoneNo IPR availablePANTHERPTHR21549:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 112coord: 18..171
IPR039902Coiled-coil domain-containing protein CCDC148/CCDC112PANTHERPTHR21549MUTATED IN BLADDER CANCER 1coord: 18..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1142contigS-dermatodea_contig1142:9255..20349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1142.919.1mRNA_S-dermatodea_contig1142.919.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1142 9255..20385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1142.919.1 ID=prot_S-dermatodea_contig1142.919.1|Name=mRNA_S-dermatodea_contig1142.919.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
MRDLHRVSAMGTFPSTVSPQRQQKQRQALSEWSRESTGLRRIAALLDREV
HQSFYATRSDLQERAAALLELEKVDTAARRAESVGVRKRLQTQKAAMSEA
KVSIRRLEEGEGIARDLDIILGELEDELYDFKRGMRKDLEQLAVREKQLS
TEMDDLRGNMKGWENNTRGDQVNADQKAATAATAAAAAGGGGGGGGKTRG
HGDVKPFHQVVDGDDDDTYARGGGVDGGDKSYGEMVERVNAL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039902CCDC148/CCDC112