prot_S-dermatodea_contig1138.893.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1138.893.1
Unique Nameprot_S-dermatodea_contig1138.893.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length199
Homology
BLAST of mRNA_S-dermatodea_contig1138.893.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 9.800e-25
Identity = 79/180 (43.89%), Postives = 87/180 (48.33%), Query Frame = 0
Query:    1 GALVFEGPSTFTLNEAHTSDSTNVGRGGGISNTKSGSITFKSTLSMASHNAAGSFEGDGGAIYTRGLITVEGESSFVDNTSADGGAI-TIEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGVGGAIYNAGDGVLTFGGGDTTFSNNWAAAGGAIYNSD 179
            G L FEG +TF  NE HT DS   G+ G ISNT SG+I FKS L+M  + A G FEG GGAIY RG I VEGES F  NTS+DGG I                                                    GDGG+GGAIYN   GV+T  G  TTF  N A  GGAIY SD
Sbjct:  161 GTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMG-STTFRENAAFMGGAIYTSD 339          
BLAST of mRNA_S-dermatodea_contig1138.893.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 7.050e-24
Identity = 83/207 (40.10%), Postives = 98/207 (47.34%), Query Frame = 0
Query:    1 GALVFEGPSTFTLNEAHTSDSTNVGRGGGISNTKSGSITFKSTLSMASHNAAGSFEGDGGAIYTRGLITVEGESSFVDNTSADGGAITIEP-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGVGGAIYNAGDGVLTFGGGDTTFSNNWAAAGGAIY-------NSDAASINSLDDGQVIFTANDAD 199
            G L FEG +TF  N  HT DS   G+ G ISNT SG+I FKS L+M  + A G FEG GGAIY RG I V+GES F  NT++DGG I   P                                                GDGG+GGAIYN  +G +T  G  TTF  N A  GGAIY       N +AAS+ +  D   +F  N AD
Sbjct:  161 GTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMG-STTFRENAAYEGGAIYTDDGSVANGEAASVTTFPD-DTVFEDNRAD 365          
BLAST of mRNA_S-dermatodea_contig1138.893.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.820e-15
Identity = 47/87 (54.02%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 GALVFEGPSTFTLNEAHTSDSTNVGRGGGISNTKSGSITFKSTLSMASHNAAGSFEGDGGAIYTRGLITVEGESSFVDNTSADGGAI 87
            G L F+G +TF  N AHT  S   G GG ISNT SG+I FKS L+M  + A  +F G GGAIY RG I VEG S F  N +A GG I
Sbjct:   46 GTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGI 132          
BLAST of mRNA_S-dermatodea_contig1138.893.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.610e-5
Identity = 54/157 (34.39%), Postives = 64/157 (40.76%), Query Frame = 0
Query:   46 MASHNAAGSFEGDGGAIYTRGLITVEGESSFVDNTSADGGAI-TIEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGVGGAIYNAGDGVLTFGGGDTTFSNNWAAAGGAIYNSDA--ASINSLDDGQVIFTANDAD 199
            M  ++  G + G GGAIY RG ITVEGES F +N S+DGG I                                                     DGG GGAI+N   GV+T  G  TTF  N A  GGAIY  D   AS+ +  D   +F  N AD
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMG-PTTFRENGAWWGGAIYTDDGYPASVTTFPD-DTVFEDNSAD 155          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1138.893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI9.800e-2543.89Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI7.050e-2440.10Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI3.820e-1554.02Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI1.610e-534.39Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 161..177
e-value: 0.0096
score: 16.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1138contigS-dermatodea_contig1138:8994..11489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1138.893.1mRNA_S-dermatodea_contig1138.893.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1138 8994..11489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1138.893.1 ID=prot_S-dermatodea_contig1138.893.1|Name=mRNA_S-dermatodea_contig1138.893.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=199bp
GALVFEGPSTFTLNEAHTSDSTNVGRGGGISNTKSGSITFKSTLSMASHN
AAGSFEGDGGAIYTRGLITVEGESSFVDNTSADGGAITIEPPGTVTLLGF
ATFSENLCKDARGGAVFNLGALNVLGGGLFDDNYASSAGDGGVGGAIYNA
GDGVLTFGGGDTTFSNNWAAAGGAIYNSDAASINSLDDGQVIFTANDAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat