prot_S-dermatodea_contig11378.889.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11378.889.1
Unique Nameprot_S-dermatodea_contig11378.889.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length305
Homology
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BLAST of mRNA_S-dermatodea_contig11378.889.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.140e-46
Identity = 121/238 (50.84%), Postives = 151/238 (63.45%), Query Frame = 0 
Query:   69 PLCSGDPARVDELISEAKQAKAAEWALRQEAATLQARKARLERKVLKLQRDKEDMTAGHRDQLERLRRELEDDARDGARRLESELERGHAKSMDGLRLTLRSETERLAGETQRLRDDLERAKHAQSTAANKKKALGSSGGGGVGGRSHSAGTNPNGVGGLFGDDAAGDAAAPVPESP-GFWKSFTRTFSPRDF-DGETGSAGGXXXXXXXXXXVPPPALLVLAAVPLFCFYRRWQNRR 304
            PLCSG+P ++D L+SEA++AK AE ALR EAA L+ RKA L+  + +L+RDK D+T  H  Q+ERLRR+L++DARDG RRLESELE+GHAKSMD LRLTL++E E LAGET+RLR+DL+RA+ A+S A               GG+S +               A     A VP  P GFW S T  F+PRD  DG     G           VPPPALLVLAAVPLFCF +R + +R
Sbjct:   91 PLCSGEPGKIDGLVSEAREAKEAEGALRAEAAILRERKAVLDADIRRLERDKADLTEEHLAQMERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAAXXXXXXXXXXSPRTKGGKSSARSI------------ARDTPPAAVPALPAGFWNSLTSAFTPRDLLDGVAVGVGDGGNGA-----VPPPALLVLAAVPLFCFIKRRRIQR 311
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BLAST of mRNA_S-dermatodea_contig11378.889.1 vs. uniprot
Match: D7G1T9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T9_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 9.340e-29
Identity = 88/178 (49.44%), Postives = 104/178 (58.43%), Query Frame = 0 
Query:  131 LERLRRELEDDARDGARRLESELERGHAKSMDGLRLTLRSETERLAGETQRLRDDLERAKHAQSTAANKKKALGSSGGGGVGGRSHSAGTNPNGVGGLFG--DDAAGDAAAPVPESP-GFWKSFTRTFSPRDF-DGETGSAGGXXXXXXXXXXVPPPALLVLAAVPLFCFYRRWQNRR 304
            +ERLRR+L++DARDG RRLESELE+GHAKSMD LRLTL++E E LAGET+RLR+DL+RA+ A+S                           P   GG       A    AA VP  P GFW S T  F+PRD  DG     G           VPPPALLVLAAVPLFCF +RW+ +R
Sbjct:    1 MERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAXXXXXXXXX---------------XXPRAKGGKSSARSIARDTPAAAVPALPAGFWNSLTSAFTPRDLLDGVAVGVGDGGNGA-----VPPPALLVLAAVPLFCFLKRWRIQR 158
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11378.889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNU8_9PHAE2.140e-4650.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T9_ECTSI9.340e-2949.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..126
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..304
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..297
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11378contigS-dermatodea_contig11378:897..1811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11378.889.1mRNA_S-dermatodea_contig11378.889.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11378 897..1811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11378.889.1 ID=prot_S-dermatodea_contig11378.889.1|Name=mRNA_S-dermatodea_contig11378.889.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=305bp
AAAAAETAAGSRPDDVVFSHPGAFGVAMLPPKAVKAGFFARRRRKASGKS
PTDDPNASLTEMQQQQQQPLCSGDPARVDELISEAKQAKAAEWALRQEAA
TLQARKARLERKVLKLQRDKEDMTAGHRDQLERLRRELEDDARDGARRLE
SELERGHAKSMDGLRLTLRSETERLAGETQRLRDDLERAKHAQSTAANKK
KALGSSGGGGVGGRSHSAGTNPNGVGGLFGDDAAGDAAAPVPESPGFWKS
FTRTFSPRDFDGETGSAGGAGGGQGEGGGVPPPALLVLAAVPLFCFYRRW
QNRR*
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