prot_S-dermatodea_contig11372.884.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11372.884.1
Unique Nameprot_S-dermatodea_contig11372.884.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length83
Homology
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BLAST of mRNA_S-dermatodea_contig11372.884.1 vs. uniprot
Match: A0A6H5K0S5_9PHAE (Codanin-1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0S5_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.310e-14
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 0 
Query:    3 PVKAFDISSAQEFPSLAPVDAPLRSRGATKQRRRIRPTTVSESDKPIEGDITVFGA--SPAPSWGRMDDTATRRLPLHA 79
            P  AFDISSA +FP+L   + P   R A KQ+RRIRPT +S +DKP+EGDIT  GA  + APS+ +  + A  RL   A
Sbjct:  108 PTTAFDISSADDFPALPMGEVPRGMRPANKQKRRIRPTPLSNADKPLEGDITALGALNTAAPSFDKSGEVANARLTFRA 186
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11372.884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0S5_9PHAE1.310e-1450.63Codanin-1_C domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11372contigS-dermatodea_contig11372:535..1410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11372.884.1mRNA_S-dermatodea_contig11372.884.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11372 534..1410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11372.884.1 ID=prot_S-dermatodea_contig11372.884.1|Name=mRNA_S-dermatodea_contig11372.884.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp
PSPVKAFDISSAQEFPSLAPVDAPLRSRGATKQRRRIRPTTVSESDKPIE
GDITVFGASPAPSWGRMDDTATRRLPLHAPRFG
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