prot_S-dermatodea_contig11289.821.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11289.821.1
Unique Nameprot_S-dermatodea_contig11289.821.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length133
Homology
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 3.920e-56
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    1 MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKGNGSRRKSRDRRRMEDVFRGPTAVAPSLQPYVAGAGAVETGLYRFLSPIAIQIVERPPLA-GQGDT 114
            +HGKGWKKIASLIKTRTVVQIRTHAQKYFQK+AKAKQNG+HG+V +D+KG+GSRRKSR RRRMED+ RG TAVAPSLQPYVAGAGAVETGLYRFLSPI IQ +ERPP A GQG T
Sbjct:   23 LHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPITIQDLERPPAAAGQGGT 137          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 3.940e-46
Identity = 92/121 (76.03%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKGNGSRRKSRDRRRMEDVFRGPTAVAPSLQPYVAGAGAVETGLYRFLSPIAIQIVERPPLAGQGDTTAGTGAA 121
            +HGKGWKKIASLIKTRTVVQIRTHAQKYFQK+AKAKQNG+HG+V +D+KG+GSRRKSR RRRMED+ RG TAVAPSLQPYVAGAGAVETGLYRFL+  A         AG   TTA  GAA
Sbjct:  591 LHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLAGHASS------SAGASPTTATAGAA 705          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.910e-23
Identity = 64/104 (61.54%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    1 MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNG-DHGEVPIDAKGNGSRRKSRDRRRMEDVFRGPTAVAPSLQPYVAGAG---AVETGLYRFLSPIAI 100
            MHGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAKQ G + G V +D +G G +   R    +E      TAVAPSLQPY+   G   +VE+GLY+FLSP  I
Sbjct:   48 MHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGAEPGAVLLD-RGLGRKNGKRKSGSLEG-----TAVAPSLQPYMTLPGVNGSVESGLYKFLSPNVI 145          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.960e-20
Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKGN---GSRRKSRDRRR-------MEDVFRGPTAVAPSLQPYVAGA----------------GAVETGLYRFLSPIAI 100
            MHGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAK+NG HG++ +  +G    G R K   +RR       +        A++P+LQ Y+ G+                 A+E GLYRFLSP+ +
Sbjct:  117 MHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDM-LGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVL 241          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.380e-17
Identity = 40/49 (81.63%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    2 HGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V +DA+G
Sbjct:  185 HGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVSMDARG 233          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.090e-16
Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            +HGKGWKKIA LIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+VP++ +G
Sbjct:   61 LHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVPMEGRG 110          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 82.4 bits (202), Expect = 2.850e-16
Identity = 38/49 (77.55%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    2 HGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V ++ +G
Sbjct:  135 HGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG 183          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A6S8P3T4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8P3T4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.320e-16
Identity = 39/49 (79.59%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    2 HGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ GEV ++ +G
Sbjct:   63 HGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGEVIMEGRG 111          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 82.4 bits (202), Expect = 9.840e-16
Identity = 38/49 (77.55%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    2 HGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V ++ +G
Sbjct:  135 HGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG 183          
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Match: A0A7S1ZJN8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZJN8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.040e-15
Identity = 38/49 (77.55%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    2 HGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG 50
            HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V ++ +G
Sbjct:  200 HGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVSMEGRG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11289.821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G656_ECTSI3.920e-5684.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H1_9PHAE3.940e-4676.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4FI15_9STRA4.910e-2361.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TWM0_9STRA1.960e-2047.62SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1V9A3_9STRA8.380e-1781.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0GFF0_9STRA2.090e-1676.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J9S9N3_PHATR2.850e-1677.55Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A6S8P3T4_9STRA7.320e-1679.59Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7GAW9_PHATC9.840e-1677.55Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZJN8_9STRA1.040e-1577.55Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 2..28
e-value: 2.2E-5
score: 24.5
NoneNo IPR availableGENE3D1.10.10.60coord: 1..34
e-value: 7.7E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 1..106
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 1..106
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..33
score: 13.33
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11289contigS-dermatodea_contig11289:1112..5701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11289.821.1mRNA_S-dermatodea_contig11289.821.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11289 1055..7036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11289.821.1 ID=prot_S-dermatodea_contig11289.821.1|Name=mRNA_S-dermatodea_contig11289.821.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=133bp
MHGKGWKKIASLIKTRTVVQIRTHAQKYFQKVAKAKQNGDHGEVPIDAKG
NGSRRKSRDRRRMEDVFRGPTAVAPSLQPYVAGAGAVETGLYRFLSPIAI
QIVERPPLAGQGDTTAGTGAAGAAGGHPGAGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf