prot_S-dermatodea_contig11287.820.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11287.820.1
Unique Nameprot_S-dermatodea_contig11287.820.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length107
Homology
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BLAST of mRNA_S-dermatodea_contig11287.820.1 vs. uniprot
Match: D7FMT1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMT1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.160e-23
Identity = 52/73 (71.23%), Postives = 56/73 (76.71%), Query Frame = 0 
Query:   35 LMEYVGSLAQPSYIQALAGWAVVWAALVSIPPGHHAQKNVIMMNMAHGLVAAGLATVTIWTGWDSTFSTAASV 107
            L E +    Q SY+QALAGW V+W ALVSIPPGH  QKNVIMMNMAHG VA  LA VTI TG DSTFSTA+SV
Sbjct:    4 LKEQIAGWPQFSYVQALAGWFVLWTALVSIPPGHTEQKNVIMMNMAHGAVATSLAVVTILTGCDSTFSTASSV 76
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11287.820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMT1_ECTSI1.160e-2371.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11287contigS-dermatodea_contig11287:3429..7313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11287.820.1mRNA_S-dermatodea_contig11287.820.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11287 3428..7313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11287.820.1 ID=prot_S-dermatodea_contig11287.820.1|Name=mRNA_S-dermatodea_contig11287.820.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=107bp
SHQYTPAVACLQQKAKLIPPQPRSFPLLMDTAMQLMEYVGSLAQPSYIQA
LAGWAVVWAALVSIPPGHHAQKNVIMMNMAHGLVAAGLATVTIWTGWDST
FSTAASV
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