prot_S-dermatodea_contig11257.807.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11257.807.1
Unique Nameprot_S-dermatodea_contig11257.807.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length173
Homology
BLAST of mRNA_S-dermatodea_contig11257.807.1 vs. uniprot
Match: A0A6H5L1F7_9PHAE (MMR_HSR1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F7_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 5.230e-64
Identity = 113/172 (65.70%), Postives = 133/172 (77.33%), Query Frame = 0
Query:    1 MDTTAIARARAAFDICGGTGIMAAVSAAVALRPPTLVFPVGDFVTLQSSGWGGDGAPAAPLRTCRLLRALSTARDVFAAEKSEGIASGDLVSAEVVPASADSAARESPLSLELDEAIGGGAWMVRLVTTRKAVQVWKVRAAAAAASGGRAGKPLAGVQFGDLRNKERRRGRS 172
            MD   I  ARAAFD+CGGTGI+AA S A+ L PPTLVFPVGDF+TLQSSGW GDGAP A LRTCRL+R  S+ARD+FA EK EGI +G+LV AE   A  +SA R  PL L+LD  IG GAW+VRL  +RKA ++W   AA AAA+GG+ GKPLA VQFGDLR+K+RRRG+S
Sbjct:  237 MDKKEITNARAAFDVCGGTGILAAASTAIGLDPPTLVFPVGDFLTLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAGELVGAEASLAPTNSAGRAGPLPLDLDAPIGNGAWLVRLAGSRKAAKMWN--AAPAAATGGKGGKPLASVQFGDLRSKDRRRGKS 406          
BLAST of mRNA_S-dermatodea_contig11257.807.1 vs. uniprot
Match: A0A836CLS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.290e-15
Identity = 72/179 (40.22%), Postives = 87/179 (48.60%), Query Frame = 0
Query:    8 RARAAFDICGGTGIMAAVSAAVALRPP--TLVFPVGDFVTLQSSGWGGDGAPAAPLRTCRLLRALSTARDVFAAEKS--EGIASGDLVSAEVVPASADSAARESPL--------------SLELDEAIGGGAWMVRLVTTRKAVQVWKVRAAAAAASGGRAGKPLAGVQFGDLRNKERR 168
            RA AA   CGG+GI AA+ AAV L  P  TLV PVGD  TLQS GW G GAP A LR C  +   +TA  +    KS      SG+LV A  +  S   AA                    L  +EAIG G  +V + TTR+ V +W+            A  P   VQFGDLR+K R+
Sbjct:  131 RAAAACRACGGSGIPAAIVAAVGLCSPPLTLVLPVGDLATLQSLGWEGVGAPRAALRDCLQVWPGTTAAQLCEILKSPPHERLSGELVQATALSVSWSRAAAXXXXXXXXXXXXXXXVVRQLRSNEAIGAGCHVVAIETTRRPVPMWQGEXXXXXXXXXXAKLPS--VQFGDLRSKNRK 307          
BLAST of mRNA_S-dermatodea_contig11257.807.1 vs. uniprot
Match: A0A7S3TMX5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TMX5_EMIHU)

HSP 1 Score: 72.0 bits (175), Expect = 1.880e-12
Identity = 56/127 (44.09%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   17 GGTGIMAAVSAAVALRPPTLVFPVGDFVTLQSSGWGGDGAPAAPLRTCRLLRALSTARDVFAAEKSEGIASGDLVSAEVVPASADSAARESPLSLELDEAIGGGAWMVRLVTTRKAVQVWKVRAAAA 143
            G TG +  +SAAVALRPPTL FP  D  TL S G G D   AA L  C LLR LST  D   A + EG+ +GDLV AE     A          +  D+ +     +VRL T R A   W+ RA AA
Sbjct:   60 GSTGTLDVLSAAVALRPPTLAFPSSDLATLASLGRGAD---AARLFDCLLLRPLSTVADFCEAVRREGLCAGDLVRAE-----ARGVFTPEVAVVRRDDVVAAKGPIVRLQTRRAA---WQGRAEAA 175          
BLAST of mRNA_S-dermatodea_contig11257.807.1 vs. uniprot
Match: R1DHV0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DHV0_EMIHU)

HSP 1 Score: 71.6 bits (174), Expect = 2.140e-11
Identity = 56/127 (44.09%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   17 GGTGIMAAVSAAVALRPPTLVFPVGDFVTLQSSGWGGDGAPAAPLRTCRLLRALSTARDVFAAEKSEGIASGDLVSAEVVPASADSAARESPLSLELDEAIGGGAWMVRLVTTRKAVQVWKVRAAAA 143
            G TG +  +SAAVALRPPTL FP  D  TL S G    GA AA L  C LLR LST  D+  A + EG+ +GDLV AE     A          +  D+ +     +VRL T R A   W+ RA AA
Sbjct:  631 GSTGTLDVLSAAVALRPPTLAFPSSDLATLASLG---RGANAARLFDCLLLRPLSTVADLCEAVRREGLCAGDLVRAE-----ARGVFTPEVAVVRRDDVVAAKGPIVRLQTRRAA---WQGRAEAA 746          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11257.807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L1F7_9PHAE5.230e-6465.70MMR_HSR1_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CLS2_9STRA1.290e-1540.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3TMX5_EMIHU1.880e-1244.09Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
R1DHV0_EMIHU2.140e-1144.09Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11257contigS-dermatodea_contig11257:1036..1554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11257.807.1mRNA_S-dermatodea_contig11257.807.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11257 32..1913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11257.807.1 ID=prot_S-dermatodea_contig11257.807.1|Name=mRNA_S-dermatodea_contig11257.807.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp
MDTTAIARARAAFDICGGTGIMAAVSAAVALRPPTLVFPVGDFVTLQSSG
WGGDGAPAAPLRTCRLLRALSTARDVFAAEKSEGIASGDLVSAEVVPASA
DSAARESPLSLELDEAIGGGAWMVRLVTTRKAVQVWKVRAAAAAASGGRA
GKPLAGVQFGDLRNKERRRGRS*
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