prot_S-dermatodea_contig112.775.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig112.775.1
Unique Nameprot_S-dermatodea_contig112.775.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length885
Homology
BLAST of mRNA_S-dermatodea_contig112.775.1 vs. uniprot
Match: D7G6U0_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U0_ECTSI)

HSP 1 Score: 724 bits (1870), Expect = 5.290e-233
Identity = 454/906 (50.11%), Postives = 558/906 (61.59%), Query Frame = 0
Query:    1 VDFASTFLNTPGEFVSIWSEVTTLTWSEVQSATAVFSTMGGILALAIFGAGLGWRFDRKDRGLPFGVKAWCNSTVVLCLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSPRVVSAA---KRGMTHDENLKELTAAVTKKKKHEIDTTTPHHLGDRRLKRNLKLLIMIHHDFVAVFYCYYQWFTRPQRVALLLCSVVTLMAADATVFSTILFQDDGTCGAMLNEADCAAAATDSVNVGGVGVSCGWDEGSRTCHQPEPEDDLETSLIVSTISLILALPFELLIIAVFAAFIVRPTLSSRGGTGARDESACELVRNVTVVDGTVATERLSKPPIQYHVFPLLLRTLRQARLAEEVELTRTAQSEDKGKLSRVCRVLCW-CRPCSGDAAREARLVRRVKKEIRPAIELEKRMAKSTDAQTQEAMLFERAEADSLTHLERAVFFKSRILNYGEEDAISPISAWAKYLAWLFIVTYAVGMAFYVCLFAVKAGKATSIQWMISFWVAFAEDILVLTPLKLAFIYLFLPSLMRHRMRPDMFTRIPRQAPSVQIARRRPDLQVSGLILRGRIPVGSEFEDFIPLFNPERRWLACVTALVFTALAMVMVLPDSLQAMVVDTVLAVVVGGGIVGLGRLFPLSRLGFLGFCGGVVLVLLIYWILHMRAVKKETEIRRARKVRDTLGFAGMDNSAFSGYN-LARDSL---ETPNSNAPSPRADRPLPDTSGTLAAERAAMPSLGRYNSPGVGTYAGTGALAQWVASIRPGSVPP---ESGVESHPN----RVGG-DAVGSIEDTPADGSRWQKHGRGHFCADSCAASDWGEVHVSEVDLSANED-----DSSTTGDGSSSKEGAGSEASWTGGRGYGPGSEWNGLNATHGSRYTRDFNSTVASSTFFGAGSPSHRA 885
            VDFASTFL+T GEF+SIW E TTLTW+EVQSA  +F+TMGGILALA+  AG GWR D+KDRG P G  AW  S                                   TV+ R  S     KRGMT DE LK L AAV    K ++D T PHHLG+RR++++LKLLIM+HHDFV+VFYCYY+WFTRPQRVALLLCSVVTLMA +ATVF++I+F+DDGTCGA  N ADCAA++T +VNVGGVG SC WDEGSRTC+ PEPE+D+ETSL++STISLILALP EL ++AVFAAF+VRPT +  G  G  D    E  R     +G      ++      HV        + ARL  EV+L R A+   +GK++R  R LC  C  C   A REARL ++VK+ + PAI LEKR+A++ D  ++EA+LFE+AEADSLT+LER VFF SRIL YG+ED++S +    K LAWLFIV YAVG++FYVCLFAVKAG+ATS+QWMISFWVAF EDI +L PLKLAF+YLFLPSLMRHRMR DMF RIPR A SVQ+ARR P+++VSG+IL+GRIP G+EFE FIPLF    RW  C+T LVFT LA++M+LPD+LQAM                                                 +KKE ++R+AR    T G     N  FSG N LAR       TPN N PSP  +         + A  A   S     SP + T     +LA+WV++++PGSV P   +   ES P     R G  ++V SI      GSRW  HGR     DSCAAS WGEVHVS+V+ S NED     D S+ G G        S  SW   +     +EW+GL  T     + D  +T +S+ F   G PSHRA
Sbjct: 1314 VDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRLDQKDRGRPAGCGAWLASLAC------------------WSKAPPSTTDNQGKTVNERRASTLHVPKRGMTRDECLKSLAAAVQGDNKDDVDATAPHHLGERRVRKSLKLLIMVHHDFVSVFYCYYEWFTRPQRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVGGVGSSCAWDEGSRTCYLPEPEEDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTKGGRAGTGD---MEAERGGKAPNGKSGGSAIASSKTVDHVEKDATGDFK-ARLTIEVDLARAAEHRREGKVTRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSLTYLERQVFFNSRILTYGDEDSLSGVPLCIKCLAWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFFEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFKRIPRHATSVQVARRHPNMEVSGMILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM-------------------------------------------------IKKEKKLRKARV---TQGAYSTGNGMFSGVNVLARGRTAGGRTPNFNTPSPGLN---------IVAGDAGFES--DQQSPTMNTV----SLARWVSAVKPGSVQPPQVDQQTESPPRPPRARHGRTNSVASIGMISEAGSRWDNHGR----LDSCAASAWGEVHVSDVESSVNEDGGNGDDESSAGTGPRFHGRDHSGRSWNLEQ-----NEWDGLGNTLSLENSVDLGTTASSTFFDDLGEPSHRA 2121          
BLAST of mRNA_S-dermatodea_contig112.775.1 vs. uniprot
Match: A0A6H5JDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC0_9PHAE)

HSP 1 Score: 633 bits (1632), Expect = 1.480e-199
Identity = 416/911 (45.66%), Postives = 517/911 (56.75%), Query Frame = 0
Query:    1 VDFASTFLNTPGEFVSIWSEVTTLTWSEVQSATAVFSTMGGILALAIFGAGLGWRFDRKDRGLPFGVKAWCNSTVVLCLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSPRVVSAA---KRGMTHDENLKELTAAVTKKKKHEIDTTTPHHLGDRRLKRNLKLLIMIHHDFVAVFYCYYQWFTRPQRVALLLCSVVTLMAADATVFSTILFQDDGTCGAMLNEADCAAAATDSVNVGGVGVSCGWDEGSRTCHQPEPEDDLETSLIVSTISLILALPFELLIIAVFAAFIVRPTLSS--RGGTGARDESACELVRNVTVVDGTVATERLSKPPIQYHVFPLLLRTLRQARLAEEVELTRTAQSEDKGKLSRVCRVLCW-CRPCSGDAAREARLVRRVKKEIRPAIELEKRMAKSTDAQTQEAMLFERAEADSLTHLERAVFFKSRILNYGEEDAISPISAWAKYLAWLFIVTYAVGMAFYVCLFAVKAGKATSIQWMISFWVAFAEDILVLTPLKLAFIYLFLPSLMRHRMRPDMFTRIPRQAPSVQIARRRPDLQVSGLILRGRIPVGSEFEDFIPLFNPERRWLACVTALVFTALAMVMVLPDSLQAMVVDTVLAVVVGGGIVGLGRLFPLSRLGFLGFCGGVVLVLLIYWILHMRAVKKETEIRRARKVRDTLGFAGMDNSAFSGYN-LARDSL---ETPNSNAPSPRADRPLPDTSGTLAAERAAMPSLGRYNSPGVGTYAGTGALAQWVASIRPGSV-----------PPESGVESHPNRVGGDAVGSIEDTPADGSRWQKHGRGHFCADSCAASDWGEVHVSEVDLSANE-----DDSSTTGDGSSSKEGAGSEASWTGGRGYGPGSEWNGLNATHGSRYTRDFNSTVASSTFFGAGSPSHRA 885
            VDFASTFL+T GEF+SIW E TTLTW+EVQSA  +F+TMGGILALA+  AG GWR D+KDRG P G  AW  S                                    ++ R  S     KRGMT DE LK L AAV    K  +D T PHHLG+RR++++LKLLIMIHHDFV+VFYC+Y+WFTRPQRVALLLCSVVTLMA +ATVF++I+F+DDGTCGA  N ADCAA++T +VNV GVG SC WDEGSRTC+ PEPE+D+ETSL++STISLILALP EL ++AVFAAF+VRPT ++  R GTG  +    EL   +  V                        TL  ARL  EV+L R A+   +GK++R  R LC  C  C   A REARL ++VK+ +  AI LEK++A++ D  ++EA+LFE+AEADSL +LER VFF SRILNYGEED+ S +    K LAWLFIV YAVG++FYVCLFAVKAG+ATS+QWMISFWVAFAE                                         +ARR P+++VSGLIL+GRIP G+EFE FIPLF    RW  C+T LVFT LA++M+LPD+LQAM                                                 +KKE ++R+AR    T G     N  FSG N LAR       TPN N PSP  +         + A  A   S  R  SP + T     +LA+WV++++PGSV           PP     +H       ++G I +    GSRW  HGR     DSCAAS WGEVHVS+V+ S NE     DD S+ G G        S  SW   +     +EW+GL  T   + + D  +T + + F   G PSHRA
Sbjct: 1292 VDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRLDQKDRGRPAGCGAWLASLAC------------------WSKAPPPTTDNQGKALNERRASTLRVPKRGMTRDECLKSLAAAVRGDNKDNVDATAPHHLGERRVRKSLKLLIMIHHDFVSVFYCFYEWFTRPQRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVAGVGSSCAWDEGSRTCYLPEPEEDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTNGDRAGTGDMEAERWELREELVAV------------------------TLLGARLTIEVDLARAAEHRREGKMTRFWRSLCCGCGFCGDGAKREARLQKKVKRSLGAAITLEKKIAQTGDVDSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSQSGVPLCIKCLAWLFIVMYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFAE-----------------------------------------VARRHPNMEVSGLILQGRIPNGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM-------------------------------------------------MKKEKKLRKARV---TQGGYSSGNGTFSGVNVLARGRTAGGRTPNFNTPSPGLN---------IVAGNAGFQSDQR--SPTMNTA----SLARWVSAVKPGSVQRPQVDQQTKSPPRPPRANHGRTNSLASIGMISEA---GSRWDHHGR----LDSCAASAWGEVHVSDVESSVNEGGGNGDDESSVGTGPRLHGRDHSGGSWNLQQ-----NEWDGLGNTLSLQNSVDLGTTASFTFFDDLGDPSHRA 2040          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig112.775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6U0_ECTSI5.290e-23350.11REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JDC0_9PHAE1.480e-19945.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 483..493
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 581..599
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 494..519
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 605..627
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 634..651
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 652..885
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 600..604
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 628..633
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..459
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 520..580
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 460..482
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..53
NoneNo IPR availableTMHMMTMhelixcoord: 460..482
NoneNo IPR availableTMHMMTMhelixcoord: 634..656
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 605..627
NoneNo IPR availableTMHMMTMhelixcoord: 581..600
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 497..519
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig112contigS-dermatodea_contig112:5874..12558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig112.775.1mRNA_S-dermatodea_contig112.775.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig112 5874..12558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig112.775.1 ID=prot_S-dermatodea_contig112.775.1|Name=mRNA_S-dermatodea_contig112.775.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=885bp
VDFASTFLNTPGEFVSIWSEVTTLTWSEVQSATAVFSTMGGILALAIFGA
GLGWRFDRKDRGLPFGVKAWCNSTVVLCLCCCGMFLKKKPQETPVQQPPE
ESKQNGSTTVSPRVVSAAKRGMTHDENLKELTAAVTKKKKHEIDTTTPHH
LGDRRLKRNLKLLIMIHHDFVAVFYCYYQWFTRPQRVALLLCSVVTLMAA
DATVFSTILFQDDGTCGAMLNEADCAAAATDSVNVGGVGVSCGWDEGSRT
CHQPEPEDDLETSLIVSTISLILALPFELLIIAVFAAFIVRPTLSSRGGT
GARDESACELVRNVTVVDGTVATERLSKPPIQYHVFPLLLRTLRQARLAE
EVELTRTAQSEDKGKLSRVCRVLCWCRPCSGDAAREARLVRRVKKEIRPA
IELEKRMAKSTDAQTQEAMLFERAEADSLTHLERAVFFKSRILNYGEEDA
ISPISAWAKYLAWLFIVTYAVGMAFYVCLFAVKAGKATSIQWMISFWVAF
AEDILVLTPLKLAFIYLFLPSLMRHRMRPDMFTRIPRQAPSVQIARRRPD
LQVSGLILRGRIPVGSEFEDFIPLFNPERRWLACVTALVFTALAMVMVLP
DSLQAMVVDTVLAVVVGGGIVGLGRLFPLSRLGFLGFCGGVVLVLLIYWI
LHMRAVKKETEIRRARKVRDTLGFAGMDNSAFSGYNLARDSLETPNSNAP
SPRADRPLPDTSGTLAAERAAMPSLGRYNSPGVGTYAGTGALAQWVASIR
PGSVPPESGVESHPNRVGGDAVGSIEDTPADGSRWQKHGRGHFCADSCAA
SDWGEVHVSEVDLSANEDDSSTTGDGSSSKEGAGSEASWTGGRGYGPGSE
WNGLNATHGSRYTRDFNSTVASSTFFGAGSPSHRA
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