prot_S-dermatodea_contig11175.758.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11175.758.1
Unique Nameprot_S-dermatodea_contig11175.758.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length725
Homology
BLAST of mRNA_S-dermatodea_contig11175.758.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 5.940e-103
Identity = 312/679 (45.95%), Postives = 367/679 (54.05%), Query Frame = 0
Query:   91 MRRLGSRQSTRHQSIEDDLWGWFGDDRPLSEAGDHPVHHRSFSRVGDRADFAGASAXXXXXXXXXXXLRDAEVTVSTLALTERLAKLSAGRALLDRVRGDNQSLASVVSSAAQSAFAPASDEPGAXXXXXXXXXXSFSSEVPGESVAA--------GAAATEAPRTP-TRAVQFASDVPPA-------PAAEETEASXXXXXXXXXXXXXXXXXXGGGVA---EEEGVREAK----ASSVVAVG-----GGE---FRQAVVDTRAKLEGLQANIRRLVREGGGDEEKLEEARGRVAPLVARRTALASAAVPGAERMAVRLQEISKDRQSNHSNINAAMREVEQRARTAGGRVWALIRGRSRQIDSSSSSTPSSSDLESDQDDVVSARPHGVVDVGSTPLLPSNGDGAGDRPD----------TSAPEWVLSRPEF--MRHRGSFLDGDQLGPVRTGAAQPGLASALTELTDRAALTNGSSGSGNXXXXXXXDPSSENTSFGDLAGFVLGPGDEDRRETDDALAVLGVAMEHHSAALALLAGWMIGQRPAPVGADTPNTRGRGEGGGETYLPTSIAPPDNSAFAGTEPAGGGVMAPWLGGGRGEVG-GXAGSASGGDEDSVREMLELSRELDVLEGRVKRERYRAHRAADEEIHRTPGLYKEACALGNALILRGHDCLSQ 725
            + R  S +++RH+S+EDDLWGWFGDDRP SE   H +        GD A+ A A               +A VTVSTLALTERLAKLSAGR LLDRVR D +SLASVV+SA  SAF                          GE VAA        GAA T   R P TRAV F +   P        P AE    +    XXXXXXXXXXXXXX   VA   +E G   A     A++  A G     GG+    RQ VV+ RA++EGLQ  IRRL R GGG+    EE R RVAPLV RR  LA AA   AERMA RLQEIS+ +QSNHSN+++AMREVE+RARTAGGRVWALIRG+SRQ          SSD                ++ G+                           +APEWVLSR E   MR RGSFLDGD++GPVR  AA        TE         G + + +              SF  LA      GD +RR+TD+A++ L  AME HSAAL+ LAGWM+   P        +     E G      T I P    A  G E A GG+ +P   G  G+ G   AGS+S  +ED VR MLELSRE DVLEGRVKRER++AHRAADEEIHRTP +Y+EACALGNALIL+GHD LSQ
Sbjct:  411 LSRRPSSRASRHESVEDDLWGWFGDDRPPSETALHAMAR------GDAAESAAAGGVGVNGSAA----ENAGVTVSTLALTERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFL-------------------------GEGVAAAAAXXAMSGAAVTAEVRCPATRAVHFEAGCSPPGGRRRLRPGAEAVAEAKQTEXXXXXXXXXXXXXXXXXVASSVDENGSSGASGLGLAAAAEATGDDEKSGGQASGLRQRVVEARAEIEGLQREIRRLAR-GGGEGGHAEETRARVAPLVERRAVLAQAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRGQSRQH---------SSDXXXXXXXXXXXXXXXXLNPGAXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRAAAA-------ATEAXXXXXXXXGEASTAD--------------SFAHLARLASEDGDGERRDTDEAVSGLRDAMEQHSAALSRLAGWMVNVAPXXXXXXXXS-----EAGLMAAAQTEIHP----AAVGVE-AHGGLPSPSYPGLSGDSGFEVAGSSS--EEDGVRAMLELSRESDVLEGRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQ 1011          
BLAST of mRNA_S-dermatodea_contig11175.758.1 vs. uniprot
Match: D8LAX6_ECTSI (Outermembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.380e-99
Identity = 359/784 (45.79%), Postives = 410/784 (52.30%), Query Frame = 0
Query:    1 QTDVRVPRQGHAALCHHGKALVLGGVAEGTTFMNDCLVGAD-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASWSESSHGNMRRLGSRQSTRHQSIEDDLWGWFGDDRPLSEAGDHPVHHRSFSRVGDRADFAGASAXXXXXXXXXXXLRDAEVTVSTLALTERLAKLSAGRALLDRVRGDNQSLASVVSSAAQSAFAPASDEPGAXXXXXXXXXXSFSSEVPGESVAA----------GAAATEAPRTP-TRAVQFASDVPPAPAAEETEASXXXXXXXXXXXXXXXXXXG--------GGVAEEEGVREAKASSVVAV----------GG--GEFRQAVVDTRAKLEGLQANIRRLVREGGGDEEKLEEARGRVAPLVARRTALASAAVPGAERMAVRLQEISKDRQSNHSNINAAMREVEQRARTAGGRVWALIRGRSRQIDSSSSSTPSSSDLESDQDDVVSARPHGVVDVGSTPLLPSNGDGAGDRPD------------------------TSAPEWVLSRPEF--MRHRGSFLDGDQLGPVRTGAAQPGLASALTELTDRAALTNGSSGSGNXXXXXXXDPSSENTSFGDLAGFVLGPGDEDRRETDDALAVLGVAMEHHSAALALLAGWMIGQRPAPVGADTPNTRGRGEGGGETYLPTSIAPPDNSAFAGTEPAGGGVMAPWLGGGRGEVG-GXAGSASGGDEDSVREMLELSRELDVLEGRVKRERYRAHRAADEEIHRTPGLYKEACALGNALILRGHDCLSQ 725
            + DVRV RQ                V+EGT FMNDCL                XXXXXXXXXXXXXXXXXXXXXXXXXXXX          + R  S +++RHQS+EDDLWGWFGDDRP SE   H +        GD A+ A A               +A VTVSTLALTERLAKLSAGR LLDRVR D +SLASVV+SA  SAF                          GE VAA          G A T     P TRAV F +   P    +   +    XXXXXXXXXXXXXXX             +E G   A    + A           GG  G  RQ VV+ RA++EGLQ  IRRLVR GGG+    EE R RVAPLV RR  LA AA   AERMA RLQEIS+ +QSNHSN+++AMREVE+RARTAGGRVWALIRG+SRQ     SS                  P  V + G                                          +APEWVLSR E   MR RGSFLDGD++GPVR  AA                   G+     XXXXXXX  +S   SFG LA      GD DRR+TD+A++ L  AME HSAAL+ LAGWM    P       P       GG E  L  +    ++ A  G E A G + +P   G  GE G   AGS+S  +ED VR MLELSRE DVLE RVKRER++AHRAADEEIHRTP +Y+EACALGNALIL+GHD LSQ
Sbjct:  149 EEDVRVARQXXXXXXXXXXXXXXXXVSEGTEFMNDCLADTPGAILNNGTLVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRRPSSRASRHQSMEDDLWGWFGDDRPPSETALHAMAR------GDAAESAAAGGIGVNGSAA----ENAGVTVSTLALTERLAKLSAGRVLLDRVRADTRSLASVVTSAVHSAFL-------------------------GEGVAAAXXXXXXXVSGKAVTAQVSCPATRAVHFTAGCSPPGGRQRLRSGAEAXXXXXXXXXXXXXXXXXXXXXXXVASSVDENGSSGASGLGLAAAAESTGDDEKSGGQAGGLRQRVVEARAEIEGLQREIRRLVR-GGGEGGHAEETRARVAPLVERRAVLAPAARADAERMAKRLQEISEAQQSNHSNVDSAMREVERRARTAGGRVWALIRGQSRQH----SSXXXXXXXXXXXXXXXXLNP--VTEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPEWVLSRLELTRMRRRGSFLDGDEVGPVRAAAA-------------------GAEXXXXXXXXXXXGEASTADSFGHLARLASVDGDGDRRDTDEAVSELRDAMEQHSAALSRLAGWMFNVAPXXXXXXLP------AGGSEAGLMAAAPMENHPAAVGVE-AHGDLPSPSCPGPSGESGFEVAGSSS--EEDGVRAMLELSRESDVLESRVKRERFKAHRAADEEIHRTPEMYREACALGNALILKGHDYLSQ 862          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11175.758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNX3_9PHAE5.940e-10345.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX6_ECTSI1.380e-9945.79Outermembrane protein n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11175contigS-dermatodea_contig11175:2702..7143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11175.758.1mRNA_S-dermatodea_contig11175.758.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11175 2702..7143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11175.758.1 ID=prot_S-dermatodea_contig11175.758.1|Name=mRNA_S-dermatodea_contig11175.758.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=725bp
QTDVRVPRQGHAALCHHGKALVLGGVAEGTTFMNDCLVGADPPPAAPAST
PTAAAMAAATDAPALLGGAPLTRAGGGGGGASWSESSHGNMRRLGSRQST
RHQSIEDDLWGWFGDDRPLSEAGDHPVHHRSFSRVGDRADFAGASAGAGA
SGGGGGGLRDAEVTVSTLALTERLAKLSAGRALLDRVRGDNQSLASVVSS
AAQSAFAPASDEPGAGGGGGGGGTTSFSSEVPGESVAAGAAATEAPRTPT
RAVQFASDVPPAPAAEETEASPAEVEAEVEVVVEVEVEVGGGVAEEEGVR
EAKASSVVAVGGGEFRQAVVDTRAKLEGLQANIRRLVREGGGDEEKLEEA
RGRVAPLVARRTALASAAVPGAERMAVRLQEISKDRQSNHSNINAAMREV
EQRARTAGGRVWALIRGRSRQIDSSSSSTPSSSDLESDQDDVVSARPHGV
VDVGSTPLLPSNGDGAGDRPDTSAPEWVLSRPEFMRHRGSFLDGDQLGPV
RTGAAQPGLASALTELTDRAALTNGSSGSGNGGGNRGGDPSSENTSFGDL
AGFVLGPGDEDRRETDDALAVLGVAMEHHSAALALLAGWMIGQRPAPVGA
DTPNTRGRGEGGGETYLPTSIAPPDNSAFAGTEPAGGGVMAPWLGGGRGE
VGGGAGSASGGDEDSVREMLELSRELDVLEGRVKRERYRAHRAADEEIHR
TPGLYKEACALGNALILRGHDCLSQ
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