prot_S-dermatodea_contig11145.745.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11145.745.1
Unique Nameprot_S-dermatodea_contig11145.745.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length524
Homology
BLAST of mRNA_S-dermatodea_contig11145.745.1 vs. uniprot
Match: D7FLV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV0_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 6.960e-137
Identity = 301/575 (52.35%), Postives = 352/575 (61.22%), Query Frame = 0
Query:    1 MYLLAVQACAKGGQWERALSLMVERRTVVARE---ATNKSGGKNGRRKRKVAEGAPAAKRAAELELKITESVLSVVAEAGQFEVAMRLVQQLRSAGETPSKECYLYALRAASKWGRWDVIENLMMDMRALGVGTVAPVPQTGAMAE---VRNSSV-----------VLSSDCYPPLVEAYAQASMWEKAIGAYQEGFVAGRT--DVAAVSYRVYECVLKACVGAEDGLTALDIIRRQAAEPQD----SRQVATFSGGKGVEPSGGPPDRRCWCLAAEAIGRSGMVKEGHVVLRAMVNSGIPVRESTKMNVPSLMPLPTTNG--FDWHQRKRXXXXXR------------PGTSRLPCPTSALSGREAAIRRLL-------DTSGGDD----GAETHLEGAENSKKAIIGVELSKGVINGEGCAAAAVAAAGGQAGGSKRGLGLGRLLVSDWRFKNSEMELEARGGGLRSLERKRXXXXXXXXXXXXXXXXXXXILNAADKRRGVHGSNGASATSKEPVASGSSSAGTESPEIDLRPGGRRGRNEALTLRMRAR-RTPGVLG--RGAGNRSGRRYR 524
            MYLLAV+ACAKG QWERALSLMVERR +  RE   A  K+GGK  +R+ K+   A A K+AA   +K  E VLS V+EAGQFEVAMRLVQQ+R+AG TPSK+CYLY LRAASKWGRWDVIE+LM DMRAL VG VA   +T AM +   V N              +LSSDCY PLVEAYAQASMWE+AI AYQEGFV GR   +   V YRV+ECVLKACV   DG TAL++I RQAAEP+     S  + T   GKG E SGGPPDRRCWCLAAEA+GR+GM++EGH VL AMV+SGIP+RESTK +VPSLMPLPTT G  F+W     XXXXX             PG   LP P +    +EA +R  L       D +GG      G        + SK  + G+E  KGV+NGEGC AAAVAAA     G ++ LG+G LL +D   + SEME + + GGL   ERKR                   I       R     NG     K   A    +AG     +DLRPGGRRGRNEALTLRMR R R  G+L   RGA +R  R+ R
Sbjct:  457 MYLLAVKACAKGAQWERALSLMVERRALDVREEKEANEKNGGKPLQRQ-KMEAAAKAKKQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVVAE-KETDAMDDGVVVNNGEGKGGGGEQHRPRMLSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVFECVLKACVEVSDGRTALEVIGRQAAEPKALQKLSSAITTEGEGKGTELSGGPPDRRCWCLAAEALGRAGMIQEGHRVLMAMVDSGIPLRESTKTDVPSLMPLPTTGGGGFEWDXXXXXXXXXXXXXXXXXXXXXXPG---LPPPAAMAEMQEAVVRERLGLFSSREDGTGGGSALTGGPRESRNAVQVSKSYLSGMEFPKGVVNGEGCTAAAVAAA---TNGGEKTLGMGWLLANDLASEKSEMERDVQEGGL---ERKRRRMREFSLKRREQQKKLERICTTGAGYRSGR-LNGGLPVGKADDAGVGVTAG-----LDLRPGGRRGRNEALTLRMRVRGRRMGILRSFRGANDRPRRKER 1014          
BLAST of mRNA_S-dermatodea_contig11145.745.1 vs. uniprot
Match: A0A6H5L7D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D9_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 4.260e-86
Identity = 189/387 (48.84%), Postives = 225/387 (58.14%), Query Frame = 0
Query:  150 VLSSDCYPPLVEAYAQASMWEKAIGAYQEGFVAGRT--DVAAVSYRVYECVLKACVGAEDGLTALDIIRRQAAEPQD----SRQVATFSGGKGVEPSGGPPDRRCWCLAAEAIGRSGMVKEGHVVLRAMVNSGIPVRESTKMNVPSLMPLPTT--NGFDWHQRKRXXXXXR------------PGTSRLPCPTSALSGREAAIRRLL-------DTSGGDD----GAETHLEGAENSKKAIIGVELSKGVINGEGCAAAAVAAAGGQAGGSKRGLGLGRLLVSDWRFKNSEMELEARGGGLRSLERKRXXXXXXXXXXXXXXXXXXXILNAADKRRGVHGSNGASATSKEPVASGSSSAGTESPEIDLRPGGRRGRNEALTLRMRAR 505
            +LSSDCY PLVEAYAQASMWE+AI AYQEGFV GR   +   V YRVYECVLKACV   DG TAL++I RQAAEP+     S  + T   GKG E SGGPPDRRCWCLAAEA+GR+GM+ EGH VL AMV+SGIP+RESTK +VPSLMP+PTT   GF+W+Q   XXXXX             PG   LP P +    +EA +R  L       D  GG      G        + SK  + GVE  KGV+NGEGC AAAVAAA       ++ LG+G LL +D   + SEME   + GGL   +R+R                      A D+   ++G          PV     +    +  +DLRPGGRRGRNEALTLRMR R
Sbjct:    1 MLSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVYECVLKACVEVSDGRTALEVIGRQAAEPKALQKMSSTITTEGEGKGAELSGGPPDRRCWCLAAEALGRAGMINEGHRVLMAMVDSGIPLRESTKTDVPSLMPVPTTAGGGFEWNQXXXXXXXXXXXXXXXXXXXXXPG---LPPPAAVAEMQEAVVRERLGLFSSWEDGRGGGSAVTGGPRESRNAVQVSKNYLSGVEFPKGVVNGEGCTAAAVAAA---TKSGEKTLGMGWLLANDLTSEKSEMERGVQEGGLER-KRRRMREFSLKRREQQKKLQRIRTTGAGDRSGRINGGL--------PVGKADDAGVGVAAGLDLRPGGRRGRNEALTLRMRVR 372          
BLAST of mRNA_S-dermatodea_contig11145.745.1 vs. uniprot
Match: A0A6H5L472_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L472_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.480e-32
Identity = 86/136 (63.24%), Postives = 97/136 (71.32%), Query Frame = 0
Query:    1 MYLLAVQACAKGGQWERALSLMVERRTVVAREATN---KSGGKNGRRKRKVAEGAPAAKRAAELELKITESVLSVVAEAGQFEVAMRLVQQLRSAGETPSKECYLYALRAASKWGRWDVIENLMMDMRALGVGTVA 133
            MYLLAV+ACAKG          VERR +  RE      K+GGK  +RK KV   A A K+AA   +K  E VLS V+EAGQFEVAMRLVQQ+R+AG TPSK+CYLY LRAASKWGRWDVIE+LM DMRAL VG VA
Sbjct:  505 MYLLAVKACAKGXXXXXXXXXXVERRALDVREEKEMDEKNGGKPLKRK-KVEAVAKAKKQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVVA 639          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11145.745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLV0_ECTSI6.960e-13752.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7D9_9PHAE4.260e-8648.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L472_9PHAE1.480e-3263.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 419..449
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..238
e-value: 1.6E-11
score: 46.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11145contigS-dermatodea_contig11145:2428..7551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11145.745.1mRNA_S-dermatodea_contig11145.745.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11145 2428..7557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11145.745.1 ID=prot_S-dermatodea_contig11145.745.1|Name=mRNA_S-dermatodea_contig11145.745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=524bp
MYLLAVQACAKGGQWERALSLMVERRTVVAREATNKSGGKNGRRKRKVAE
GAPAAKRAAELELKITESVLSVVAEAGQFEVAMRLVQQLRSAGETPSKEC
YLYALRAASKWGRWDVIENLMMDMRALGVGTVAPVPQTGAMAEVRNSSVV
LSSDCYPPLVEAYAQASMWEKAIGAYQEGFVAGRTDVAAVSYRVYECVLK
ACVGAEDGLTALDIIRRQAAEPQDSRQVATFSGGKGVEPSGGPPDRRCWC
LAAEAIGRSGMVKEGHVVLRAMVNSGIPVRESTKMNVPSLMPLPTTNGFD
WHQRKRRRRRRRPGTSRLPCPTSALSGREAAIRRLLDTSGGDDGAETHLE
GAENSKKAIIGVELSKGVINGEGCAAAAVAAAGGQAGGSKRGLGLGRLLV
SDWRFKNSEMELEARGGGLRSLERKRRRMQEFSKKKQEQQQKREEILNAA
DKRRGVHGSNGASATSKEPVASGSSSAGTESPEIDLRPGGRRGRNEALTL
RMRARRTPGVLGRGAGNRSGRRYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf