prot_S-dermatodea_contig11088.712.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11088.712.1
Unique Nameprot_S-dermatodea_contig11088.712.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length117
Homology
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BLAST of mRNA_S-dermatodea_contig11088.712.1 vs. uniprot
Match: D7G271_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G271_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 6.710e-31
Identity = 71/101 (70.30%), Postives = 82/101 (81.19%), Query Frame = 0 
Query:   17 MADVDMKDASASATAAAEAGEKQAQSPRAITVADIAKNAELFVKAVETTQTRITTRAISRNTPIRRRVQADVLCDALKQMLPDDCPNKAELLLLLAKLPSK 117
            M DVDMKDASA+ATAA E GE  A  P++I V DI +NAEL VK V+    R+TTRAISRNTPIRRRVQADVLC+AL ++LPDDCP+KAEL  LLAKLPS+
Sbjct:    1 MTDVDMKDASAAATAAGEKGEVAAV-PKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCEALAKLLPDDCPDKAELTRLLAKLPSE 100
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11088.712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G271_ECTSI6.710e-3170.30PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11088contigS-dermatodea_contig11088:2413..4676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11088.712.1mRNA_S-dermatodea_contig11088.712.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11088 2413..4677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11088.712.1 ID=prot_S-dermatodea_contig11088.712.1|Name=mRNA_S-dermatodea_contig11088.712.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=117bp
RETKASACVAISKARPMADVDMKDASASATAAAEAGEKQAQSPRAITVAD
IAKNAELFVKAVETTQTRITTRAISRNTPIRRRVQADVLCDALKQMLPDD
CPNKAELLLLLAKLPSK
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