prot_S-dermatodea_contig11055.691.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11055.691.1
Unique Nameprot_S-dermatodea_contig11055.691.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length120
Homology
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Match: D8LT46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT46_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.650e-44
Identity = 82/119 (68.91%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    1 KVVRLVIYVEGEDDGHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFDGEGASRLSCPPVQLSQLLEHIHGTAEVAVGASHEVLTVRSYHHPLTGSAERAVLKTEMSIGTVEFDTYR 119
            KV+RLVIYVEGED+ HIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVF+GEGASRLSCPPVQLSQL                             G+A+RAVLKTEMSI T EFDTYR
Sbjct:  134 KVLRLVIYVEGEDEEHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFEGEGASRLSCPPVQLSQL----------------------------AGTADRAVLKTEMSISTAEFDTYR 224          
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Match: A0A6H5JSF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF7_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 7.890e-38
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 KVVRLVIYVEGEDDGHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFDGEGASRLSCPPVQLSQL 67
            KV+RLVIYVEGED+ HIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVF+GEGASRLSCPPVQLSQL
Sbjct:  143 KVLRLVIYVEGEDEEHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFEGEGASRLSCPPVQLSQL 209          
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Match: A0A7R9U6E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.010e-23
Identity = 58/121 (47.93%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    2 VVRLVIYVEGEDDGHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFDGEGASRLSCPPVQLSQLLEHIHGTAEVAVGASHEVLTVRSYHHP----LTGSAERAVLKTEMSIGTVEFDTY 118
            V RL IY+E  DD   EPHLVFQ+    G  + HR ++ D E++HAVFD  G SRL  PPV  S LLEHIHGT E+        L ++S+H+P      G  ++A L+TEMSI   EFD Y
Sbjct:   64 VARLRIYLE--DDSSPEPHLVFQLISANGVVRCHRLTIGDGEVLHAVFDDSGCSRLVGPPVTFSNLLEHIHGTDELVATVLPTSLKLKSFHNPNLADRKGRLQKA-LQTEMSIAHGEFDEY 181          
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Match: A0A835ZGY8_9STRA (Rad9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.820e-21
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    1 KVVRLVIYVEGEDDGHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFDGEGASRLSCPPVQLSQLLEHIHGTAEVAVGASHEVLTVRSYHHPLTGSAERAVLKTEMSIGTVEFDTY 118
            K+ RL I VE  D+ H+EP L+FQM+CE+G +K HR S+QDC  ++A FD  G + L   P +L  LL     +AEV      + L ++S  HP  G+  RAV+ T+M   + EFD Y
Sbjct:  109 KLHRLTIAVEEADEFHVEPRLIFQMHCEYGIKKEHRLSMQDCHSLYAHFDEAGTTSLVAAPKKLLSLLNPFDNSAEVVATVKEDNLALKS-KHPDAGT-RRAVISTQMKCASTEFDAY 224          
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Match: A0A4D9D3R3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3R3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.210e-18
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 0
Query:   17 IEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFDGEGASRLSCPPVQLSQLLEHIHGTAEVAVGASHEVLTVRSYHHPLTG-------SAERAVLKTEMSIGTVEFDTY 118
            +E  +VF+M CE+G RK H F LQDCE++HAVFD  GAS L      LSQL +H+HG+AEVA+ A  + + +RS+     G           A L TEM++   E D Y
Sbjct:  151 VEAQIVFEMECEWGVRKRHSFQLQDCEVVHAVFDRAGASCLRSHAHHLSQLFDHLHGSAEVALVAGRDGVCLRSWRGEEGGREGGLGEGPGEAFLSTEMTVKAEELDAY 259          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11055.691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LT46_ECTSI2.650e-4468.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JSF7_9PHAE7.890e-3894.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U6E5_9STRA3.010e-2347.93Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835ZGY8_9STRA6.820e-2142.37Rad9-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9D3R3_9STRA2.210e-1844.04Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007268Rad9/Ddc1PFAMPF04139Rad9coord: 19..118
e-value: 1.7E-14
score: 53.9
IPR007268Rad9/Ddc1PANTHERPTHR15237DNA REPAIR PROTEIN RAD9coord: 18..118
NoneNo IPR availableGENE3D3.70.10.10coord: 1..119
e-value: 3.7E-17
score: 64.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11055contigS-dermatodea_contig11055:2796..7182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11055.691.1mRNA_S-dermatodea_contig11055.691.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11055 2796..7182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11055.691.1 ID=prot_S-dermatodea_contig11055.691.1|Name=mRNA_S-dermatodea_contig11055.691.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
KVVRLVIYVEGEDDGHIEPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFD
GEGASRLSCPPVQLSQLLEHIHGTAEVAVGASHEVLTVRSYHHPLTGSAE
RAVLKTEMSIGTVEFDTYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007268Rad9/Ddc1