prot_S-dermatodea_contig11.654.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11.654.1
Unique Nameprot_S-dermatodea_contig11.654.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length628
Homology
BLAST of mRNA_S-dermatodea_contig11.654.1 vs. uniprot
Match: D8LI26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI26_ECTSI)

HSP 1 Score: 645 bits (1665), Expect = 7.330e-224
Identity = 381/643 (59.25%), Postives = 455/643 (70.76%), Query Frame = 0
Query:    1 MRCSGVIIARCALLLCVLADAFV-PQAPSMSSAPDSHYRPARLEKTGPPAP-FATFSSSGSNIDEAFSALGRIFCDEVGEELEQQQEARCAMGIVFFSRGEHVDVPQDPMRYVPHEDAGGVENALARLHDSLPFVNDIIASPARATSTSKKPEQEVCTQGKPAATVTVTLAFFHNQGVTIRPFVLHPVRELDRHCDRLLRGDAIGSHVGESLERSGRRRND---VSRGVE----NGLRGHHRTVCLAF-GGEVSGTDSRPGGGPCTENLCHLNEILRDAGRARGSL--RDGASRCPLVSTATSAG-PVFVSARDGRSGERVTVAADAVGAILTCLPESDSSFHLVHAGDDMPLQSSQFRVASVDGG-IAEVVPVEPKRT---TTVST-PGDHDVGQGAGAG-SFWQRPRLPCGVISAAEWCKQVVASSTRFEKVAMQSALGVGVLKRAGSREEAMHDRVHSTSAPAGVTRHLPAHGCLPVVEVNVDGSISLALN-KGARGNRREAIGATGDETVQCDLRAGDLCDIRAMGTVAAMQAEEDAYSWMRISRLSALIQSAR-DGGSETCPSLSVPAIQGCLTAASRTRFVPGSEGESCEELVRVAAGHGG-CPTAGMVGDAHFVSIDNVMMTCSSDMGTASVYVCG 621
            M  + V++ RC L + + A AFV PQ P M SA D  YRP  LEK G PAP FATF+SS S++D  F  L RI   EVG+ +EQQQ+ RCAM IV+FSR +   + QDPMR+V  +DAG +E ALARLHDSLPFV+D+IASPARAT+ S+K + +     +PAA VT TLA FHN G+  RPFVL+P REL  H DRLL+ D IG++VGESLERS  R      VS+ VE    +G RG+HRT+CLAF GGE    +S P   PCT  L  LN IL DAGR          +SRCPLVST  +AG P + S RD  S +RVTVAA+AVGAILTCLP+S++S HLVHAG+D+ L+ SQFRVASV GG IAEVVPVE K+T   T V T  G    G GAGAG S WQRPR PCGVISAAEWCKQVV++STRFEK+A+QSALGVGVL+RAG+RE A      +   PAGV R+LPAHGCL V EV  D SISLA + +G + +RR   G  G   V+C +R GDLCDIRA+G +AAMQAE+DAYSW+RI+RLS LIQ A  D  + +  + + P   GCLTA +R R  PG+E ESCEELVRVAAGHG  CPTAGMVGDA  VS+DNVMMTCS  +G +SVYVCG
Sbjct:    1 MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVIAEVGDSMEQQQQQRCAMAIVYFSREDEASL-QDPMRHVLQDDAGEIEIALARLHDSLPFVDDVIASPARATTVSQKNQNQGARNEEPAAAVTATLALFHNPGLDARPFVLNPARELGLHGDRLLQEDEIGAYVGESLERSASRYGGGEKVSQAVEAGGSSGPRGYHRTMCLAFSGGEGGAVESEPSD-PCTSTLHRLNGILGDAGRRESGAGSSSSSSRCPLVSTVAAAGYPAYASVRDPDSRKRVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVWGGDIAEVVPVESKQTEAATGVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKLAIQSALGVGVLQRAGAREGAAA-LGQAGGTPAGVARNLPAHGCLSVTEVKADESISLARSGRGEQDDRRRGDG--GSAGVECGVRPGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSVLIQGATGDREASSATAAAAPVFHGCLTAGTRARCTPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCG 638          
BLAST of mRNA_S-dermatodea_contig11.654.1 vs. uniprot
Match: A0A6H5KMN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN4_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 5.440e-172
Identity = 302/500 (60.40%), Postives = 353/500 (70.60%), Query Frame = 0
Query:  145 STSKKPEQEVCTQGKPAA---TVTVTLAFFHNQGVTIRPFVLHPVRELDRHCDRLLRGDAIGSHVGESLERSGRRRN---DVSRGVE----NGLRGHHRTVCLAFGGEVSGTDSRPGGGPCTENLCHLNEILRDAGRAR---GSLRDGASRCPLVSTATSAG-PVFVSARDGRSGERVTVAADAVGAILTCLPESDSSFHLVHAGDDMPLQSSQFRVASVDGG-IAEVVPVEPKRT---TTVST-PGDHDVGQGAGAG-SFWQRPRLPCGVISAAEWCKQVVASSTRFEKVAMQSALGVGVLKRAGSREEAMHDRVHSTSAPAGVTRHLPAHGCLPVVEVNVDGSISLALN-KGARGNRREAIGATGDETVQCDLRAGDLCDIRAMGTVAAMQAEEDAYSWMRISRLSALIQSAR-DGGSETCPSLSVPAIQGCLTAASRTRFVPGSEGESCEELVRVAAGHGG-CPTAGMVGDAHFVSIDNVMMTCSSDMGTASVYVCG 621
            S S+K +++     KPAA   TVT TLAFFHN G+  RPFVLHP REL  H DRLL+ D IG++VGESLERS  R +   +VS GVE    +G RGHHRT+CLAF G   G         CT  L  LN IL DAGR +   GS    +SRCPLVST  +AG P + S RD  S ERVTVAA+AVGAILTCLP+S++S HLVHAG+D+ L+ SQFRVASV GG IAEVVP+E K+T   T V T  G    G GAGAG S WQRPR PCGVISAAEWCKQVV++STRFEK AMQSALG+GVL+RAG+RE A      +  APAGV R+LPAHG L V EV  D SISLA   +G + +RR   G  G    +C +R GDLCDIRA+G +AAMQAE+DAYSW+RI+RLSALIQ A  D  + +  + + P  QGCLTA +R R  PG+E ESCEELVRVAAGHG  CPTAGMVGDA  VS+DNVMMTCS  +G +SVYVCG
Sbjct:   30 SVSQKNQEQGAGNEKPAAVTVTVTATLAFFHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRHDGGEEVSHGVEAGGGSGARGHHRTMCLAFSGGGGGAVGSEPSDLCTSTLHRLNGILGDAGRRKSGAGSSSSSSSRCPLVSTVAAAGYPAYASVRDPGSRERVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVSGGDIAEVVPLESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKFAMQSALGIGVLQRAGAREGAAA-LGQAGGAPAGVARNLPAHGYLSVTEVKTDESISLAHGGRGEQDDRRRGDG--GRAAAECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCG 526          
BLAST of mRNA_S-dermatodea_contig11.654.1 vs. uniprot
Match: A0A6H5KUX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX6_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.800e-26
Identity = 70/147 (47.62%), Postives = 91/147 (61.90%), Query Frame = 0
Query:    1 MRCSGVIIARCALLLCVLADAFV-PQAPSMSSAPDSHYRPARLEKTGPPAP-FATFSSSGSNIDEAFSALGRIFCDEVGEELEQQQEAR--------CAMGIVFFSRGEHVDVPQDPMRYVPHEDAGGVENALARLHDSLPFVNDII 137
            M  + V++ RC L + + A AFV PQ   M SA D  YRP  LEK G PAP FATF+SS S++D  F  L RI   EVG+ +EQ             CA+ +V+FS+ +   + QDPM  V  +DAG +E+ALARLHDSLPFV+DI+
Sbjct:    1 MSVTRVMLVRCTLSMLLGAHAFVVPQPSCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQXXXXXXXXXXXXXCAIAVVYFSKEDEASL-QDPMCRVLQDDAGEIESALARLHDSLPFVDDIV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11.654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI26_ECTSI7.330e-22459.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN4_9PHAE5.440e-17260.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUX6_9PHAE1.800e-2647.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..627
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11contigS-dermatodea_contig11:54999..59484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11.654.1mRNA_S-dermatodea_contig11.654.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11 54948..60551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11.654.1 ID=prot_S-dermatodea_contig11.654.1|Name=mRNA_S-dermatodea_contig11.654.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=628bp
MRCSGVIIARCALLLCVLADAFVPQAPSMSSAPDSHYRPARLEKTGPPAP
FATFSSSGSNIDEAFSALGRIFCDEVGEELEQQQEARCAMGIVFFSRGEH
VDVPQDPMRYVPHEDAGGVENALARLHDSLPFVNDIIASPARATSTSKKP
EQEVCTQGKPAATVTVTLAFFHNQGVTIRPFVLHPVRELDRHCDRLLRGD
AIGSHVGESLERSGRRRNDVSRGVENGLRGHHRTVCLAFGGEVSGTDSRP
GGGPCTENLCHLNEILRDAGRARGSLRDGASRCPLVSTATSAGPVFVSAR
DGRSGERVTVAADAVGAILTCLPESDSSFHLVHAGDDMPLQSSQFRVASV
DGGIAEVVPVEPKRTTTVSTPGDHDVGQGAGAGSFWQRPRLPCGVISAAE
WCKQVVASSTRFEKVAMQSALGVGVLKRAGSREEAMHDRVHSTSAPAGVT
RHLPAHGCLPVVEVNVDGSISLALNKGARGNRREAIGATGDETVQCDLRA
GDLCDIRAMGTVAAMQAEEDAYSWMRISRLSALIQSARDGGSETCPSLSV
PAIQGCLTAASRTRFVPGSEGESCEELVRVAAGHGGCPTAGMVGDAHFVS
IDNVMMTCSSDMGTASVYVCGNTEGNG*
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