prot_S-dermatodea_contig10965.636.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10965.636.1
Unique Nameprot_S-dermatodea_contig10965.636.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length290
Homology
BLAST of mRNA_S-dermatodea_contig10965.636.1 vs. uniprot
Match: D7FI24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI24_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 9.620e-56
Identity = 145/376 (38.56%), Postives = 180/376 (47.87%), Query Frame = 0
Query:    1 WESAPECGGKANAGRHGRDSRWRSRGAA-------------GRRPVSRDAFRQLHVSERLYHMAGVFARKRESARKRRDDLQKAREAQVTSGRLSLCSKTRELTDNLPRYTYGRRSDKVEVNAEGDRWKGGGGGY------------------------------QDAGDRLYSEWQAERER--------KSRRRDLEAAREAASPGAWSCPKCGSDNRAQDGTCQTVTGIAVPAQETRPDTWHHESSEQLGRAAAAKTAAGAG----------------------------------DDRNNRNNVKGRIGDDGLKRCARPRPPMFKPTPLARP-GQDTFRMRPKGELLFDDLYRNPPTPSRRRTKRILDAETKA 290
            W SAPE G   + G   R +R    G A             GRRP SR+A RQL VSER++ +    A+++                   SGRL+LCSKTRELTDN P+Y Y R + +   +                                           + AGDRLYSEW A R+R        K+      A+RE ASP  W+CP+CG+DNRAQD TCQT TG+AV AQ+ RPDTW  ES E LGR AA                                          D   +R     R+G+DG++RC R RP MF+PTP+ARP G    R RPKGELLFD+LYRNPPTPSRRR K++L A+T+A
Sbjct:  321 WRSAPEVG---HGGGSYRANRQGFGGGAVGGXXXXXXXXXLGRRPASREAARQLRVSERMHRLGRAMAKRKXXXXXXXXXXXXXXXXXACSGRLNLCSKTRELTDNQPKYVYRRPTGRSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGDRLYSEWMASRKRNASLLAKTKAAXXXXXASRENASPEGWTCPECGADNRAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSGSR-----RVGEDGVRRCGRRRPEMFRPTPVARPSGDGAVRARPKGELLFDNLYRNPPTPSRRRAKQVLQADTRA 688          
BLAST of mRNA_S-dermatodea_contig10965.636.1 vs. uniprot
Match: A0A6H5JGR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR6_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.650e-29
Identity = 78/172 (45.35%), Postives = 95/172 (55.23%), Query Frame = 0
Query:  125 AGDRLYSEWQAERERKS----RRRDLEAAREAASPGAWSCPKCGSDNRAQDGTCQTVTGIAVPAQETRPDTWHHESSEQLGRAAAA--------------------KTAAGAGDDRNNRNNVK---------GRIGDDGLKRCARPRPPMFKPTPLARP-GQDTFRMRPKGE 262
            AGDRLYSEW A R+R +    + +   A RE ASP  W+CP+CG+ NRAQD TCQT TG+AV AQ+ RPDTW  ES E LGR AA                     K     GD R   +  +          R+G+DG++RC R RP MF+PTP+ARP      R RPKGE
Sbjct:  654 AGDRLYSEWMATRKRNASLLAKAKSAAAEREDASPEGWTCPECGAGNRAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAATASXXXXXXXXXXXXXRSTAVKPGGATGDQRGPESRRRYGXXXSSDSRRVGEDGVRRCGRRRPEMFRPTPVARPLDHGVVRARPKGE 825          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10965.636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI24_ECTSI9.620e-5638.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGR6_9PHAE1.650e-2945.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10965contigS-dermatodea_contig10965:1993..3859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10965.636.1mRNA_S-dermatodea_contig10965.636.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10965 1993..3860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10965.636.1 ID=prot_S-dermatodea_contig10965.636.1|Name=mRNA_S-dermatodea_contig10965.636.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=290bp
WESAPECGGKANAGRHGRDSRWRSRGAAGRRPVSRDAFRQLHVSERLYHM
AGVFARKRESARKRRDDLQKAREAQVTSGRLSLCSKTRELTDNLPRYTYG
RRSDKVEVNAEGDRWKGGGGGYQDAGDRLYSEWQAERERKSRRRDLEAAR
EAASPGAWSCPKCGSDNRAQDGTCQTVTGIAVPAQETRPDTWHHESSEQL
GRAAAAKTAAGAGDDRNNRNNVKGRIGDDGLKRCARPRPPMFKPTPLARP
GQDTFRMRPKGELLFDDLYRNPPTPSRRRTKRILDAETKA
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