prot_S-dermatodea_contig10955.631.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10955.631.1
Unique Nameprot_S-dermatodea_contig10955.631.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length348
Homology
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BLAST of mRNA_S-dermatodea_contig10955.631.1 vs. uniprot
Match: A0A6H5KKY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKY5_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.310e-73
Identity = 179/412 (43.45%), Postives = 217/412 (52.67%), Query Frame = 0 
Query:    3 DGSTQVICHLVKHHPMYDSVLKRAWEVAIKKPRALLRKRGGXXXXXXRKRRWPSLGRLSRSQPNMMIKEYPKKVSVVGKNHQARPRQGGEGRARRAVDPEYLCTPVSSEDYVPPEDVVFEQVWDPKVMLPPCKRAVNPPSPDRLIQEFAGSVSHDKCLEILYRCDGHFDRARQELLLHLSH-WNAVYPEAMERRRGAACARATVGVETRARVADVQALQ-----------------------------------------------------------------AAAVARRETSLSGQPGLSERQVTDLYRLPMRGIAGGEVAMNRQVEGGVSSRLPGVRSKDNLVAHLNLSRPWSPEEASTFSRALLEEGSKNFYAVQKALPDRQVCELVDRYYGGWKQTKEYKTLKESIR 348
            D + QV+ H+ +    +  +L+RAW  AI KPR L RK G XXXXXX    W     L R +  MM KEYPKKVS+VG  HQ              VDP  L  PVSSEDYVPPEDV+FEQVWDP V++P  K    P     L++EFAG VSHDKCLEI++R +G +  AR+ LL +LS  W + Y  A    R  A A+A V  ET AR+A                                                                       A+   R     +G PG  +      +  P++ +AGGE A+ RQV+GGVSS  PG RSKD L   LNL+RPW P EA+ ++RA+LEEGSKNFYA QKALP RQVCELVDRYYGGWKQT  Y+ LKESIR
Sbjct:  535 DSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLGRK-GXXXXXXXXXXXWTE---LPRRKSTMMKKEYPKKVSLVGTAHQ--------------VDPLNLPVPVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSHDKCLEIVHRFEGDYGEARK-LLRNLSRSWKSRYLMASNSTRETASAKAIVARETAARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRGGRGHVGRAGAPGTQDA----FWCRPLKSLAGGESALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPHEAAMYTRAMLEEGSKNFYAAQKALPGRQVCELVDRYYGGWKQTDGYRALKESIR 923
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10955.631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKY5_9PHAE1.310e-7343.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 285..347
e-value: 7.2E-10
score: 40.6
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 287..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10955contigS-dermatodea_contig10955:271..7405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10955.631.1mRNA_S-dermatodea_contig10955.631.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10955 259..7405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10955.631.1 ID=prot_S-dermatodea_contig10955.631.1|Name=mRNA_S-dermatodea_contig10955.631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=348bp
MHDGSTQVICHLVKHHPMYDSVLKRAWEVAIKKPRALLRKRGGSGGGSRR
KRRWPSLGRLSRSQPNMMIKEYPKKVSVVGKNHQARPRQGGEGRARRAVD
PEYLCTPVSSEDYVPPEDVVFEQVWDPKVMLPPCKRAVNPPSPDRLIQEF
AGSVSHDKCLEILYRCDGHFDRARQELLLHLSHWNAVYPEAMERRRGAAC
ARATVGVETRARVADVQALQAAAVARRETSLSGQPGLSERQVTDLYRLPM
RGIAGGEVAMNRQVEGGVSSRLPGVRSKDNLVAHLNLSRPWSPEEASTFS
RALLEEGSKNFYAVQKALPDRQVCELVDRYYGGWKQTKEYKTLKESIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf