prot_S-dermatodea_contig1090.603.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1090.603.1
Unique Nameprot_S-dermatodea_contig1090.603.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length980
Homology
BLAST of mRNA_S-dermatodea_contig1090.603.1 vs. uniprot
Match: D7G0P3_ECTSI (Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P3_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 2.050e-145
Identity = 371/855 (43.39%), Postives = 476/855 (55.67%), Query Frame = 0
Query:  226 VGSILERERAAKLAERVAALESMLAAENGKADNVEVHSGETAAEDQRRKQLVRLLRKAALLRNMLTPGGIVGG------GGTDTDAAGSCWTQDGEEGV-GGVGEGGSAKQIAGEDAADGEDLLQRLHGRLAWLEVHATETFSSDATVAAASANDTTLSNEQEGSRQGSNEGA-------RAGGT-------NIGSP-ALLAKASTTLTSLGDEGAAEEASVGGLAVAPSAEVGHGGDLEGSSAKIYDGDHVERLWRRMDDVERRIYQLAANRVPSPS---------PAGEVTASDLRELSSSLKSGASALETRLEDGLLSLGSRIDALESN-QTESTEVVAGGAADV----------------------------DIESHIQQMLTNVLKNEIPLVRRNLESVQDRVSVLEATATDKTGVGEPGLSAEEAANAAA--------EEIQTRLFAEMSALEDRVDRRARDDARRAREEREAAEARGSMRRISSTVSAYTADLAARLEVLQSEHERQGTEVARAAEEITAAEVDLKNMGSELVGLGEIANSVSIVVDGKADQADVEALKLAMQRLDTSVAAKARGATA-AARDAEAISALQVALKDMSASMEGSMRKLQQAQASAGTIKIKPILDRVVKELADAGLLPDADAGHGAIGKSMCLSCNRPMTVNGNQTPSRFASQFRG-TLGSRMEQVSPF-PLQINKPAVVWRGGFKMPP---PHSAHQNRHRSRRPESATSLGKKHPPLAGAGVGGAGLSS-----------------QGSTSDSRWNGEAGLTGNTAHDRLPGIPNILDS--------GGGEGXXXXXXXXXXX-KKVVVGSLRTSTEAPHRGRFVQ 980
            VG+I ERE   ++  RVAALE  L A+            + AA +++R+ L RL+R+  +LRN +   G+  G      G ++      CW    E+ V GG G GG  +      AAD E+L+     RLAWLE  A  T SS     +  A     +  +   +  +++           GGT       ++G   A  A  +   T+ GDEG                     GD +G          V RLWR MD++E RIY+  ++R   PS          AGEVT +DL+ L  S++  + A+  +LE+GL +L  R++ LE N ++     ++  A D                               +S I+++L  VL +EIP +RR+L  V +RV+ LEAT  +  G G  GLS EEAA AAA        EE Q RL AEMSALE+RVDRRAR++AR        AEARG+MRR+S+TVSAYTADLA RL+ L+SEHE QG  V R AEE+ AAE  L+ +GSELVGLG++ANSVS+VVDGKADQ DVEALK AMQRLD +V AKARG++A AARDAEA+ ALQVA +DMSASMEGS+RKLQQAQA+AG+IK+KP+LDRVVKEL +AG+LPD DAG GA+G+SMCLSCNRPMTV G+Q+ SRFASQFRG TLGSRME++S   P+ INKP+V+WRGGFKMPP   P SAH+ R R                   AG  G G                    Q         G  G+   +   RLPGIPN+LDS        GGG G            K+V VGSL  S++APHRGRFV+
Sbjct:   78 VGTIGERED--RIESRVAALERKLLAD--------AEGAKAAAAERKRRLLDRLMRQTIVLRNTIIAEGMAAGTEGRSEGESEAAQEEDCWAGVREDMVRGGRGSGGVGQ------AADEEELILTARARLAWLESCAENTPSSGGIAGSGPAGSGDDAETERNDQPATSDNGDIDLVVPEEGGTPASGMSDDVGQRRAAGALPAEAWTAPGDEGXXXXXXXXXXXXXXXXXXXXXGDADGE---------VARLWRWMDEIESRIYRRCSDRGRLPSRGAGDVVTSKAGEVTGADLQNLQDSVELSSLAMGNKLEEGLATLDERMNLLEGNVRSVKARALSRSALDAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXDSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVAED-GAGGAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXXAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHE-RQRXXXXXXXXXXXXXXXXXETAGAVGDGXXXXXXXXXXXXXXXXXXXXQILPPSDEVLGPGGIDA-SRDGRLPGIPNMLDSTSAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFVR 904          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1090.603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0P3_ECTSI2.050e-14543.39Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 661..695
NoneNo IPR availableCOILSCoilCoilcoord: 620..640

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1090contigS-dermatodea_contig1090:5789..13344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1090.603.1mRNA_S-dermatodea_contig1090.603.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1090 5789..13344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1090.603.1 ID=prot_S-dermatodea_contig1090.603.1|Name=mRNA_S-dermatodea_contig1090.603.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=980bp
GGRGLVVCTIDVQLLNDTVQVMHSQIGMLRQTILDLRQGVETQRAAEAEE
LEIIRRKIDSLEGAALESGHHEQEGPRLENIDDIMAALVRGAALAKESAR
LEVRLQHLESTIYGEVNDGVLGNEACEEETNPAKPAFVAEPRDSSTKEAE
GAPALLEEADRALPEFGGKAGASAVETGAAEGDAKEEGTKGKATKVAHTM
KSLAKTIAMVGGMALCPKVNKLQNQVGSILERERAAKLAERVAALESMLA
AENGKADNVEVHSGETAAEDQRRKQLVRLLRKAALLRNMLTPGGIVGGGG
TDTDAAGSCWTQDGEEGVGGVGEGGSAKQIAGEDAADGEDLLQRLHGRLA
WLEVHATETFSSDATVAAASANDTTLSNEQEGSRQGSNEGARAGGTNIGS
PALLAKASTTLTSLGDEGAAEEASVGGLAVAPSAEVGHGGDLEGSSAKIY
DGDHVERLWRRMDDVERRIYQLAANRVPSPSPAGEVTASDLRELSSSLKS
GASALETRLEDGLLSLGSRIDALESNQTESTEVVAGGAADVDIESHIQQM
LTNVLKNEIPLVRRNLESVQDRVSVLEATATDKTGVGEPGLSAEEAANAA
AEEIQTRLFAEMSALEDRVDRRARDDARRAREEREAAEARGSMRRISSTV
SAYTADLAARLEVLQSEHERQGTEVARAAEEITAAEVDLKNMGSELVGLG
EIANSVSIVVDGKADQADVEALKLAMQRLDTSVAAKARGATAAARDAEAI
SALQVALKDMSASMEGSMRKLQQAQASAGTIKIKPILDRVVKELADAGLL
PDADAGHGAIGKSMCLSCNRPMTVNGNQTPSRFASQFRGTLGSRMEQVSP
FPLQINKPAVVWRGGFKMPPPHSAHQNRHRSRRPESATSLGKKHPPLAGA
GVGGAGLSSQGSTSDSRWNGEAGLTGNTAHDRLPGIPNILDSGGGEGGVD
GGGGRRRGKKVVVGSLRTSTEAPHRGRFVQ
back to top