prot_S-dermatodea_contig10894.597.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10894.597.1
Unique Nameprot_S-dermatodea_contig10894.597.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length337
Homology
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 7.820e-141
Identity = 225/355 (63.38%), Postives = 260/355 (73.24%), Query Frame = 0
Query:    1 WRWVLAQRTGNQTVRQALITHGLPPLARRHIWAAWATVAMPETGGHNKVKESSDLIPQGPIASIIAHDVQRTKIGHPLFASGGQGMAMLKRVLLRCADLGAVKEAGYIQGMNYLAGFLLITIADAVVAERDTPETPPSRRSSTG--------TATLDSPSVXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------EPTARELEVIESESVEVMLGMIALQGGVLSRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPTAVKAVRRHAEACKTFDDLVRQAPVGLNQ 337
            WRWVLAQRT +QTVRQA+++HGLP   RRHIWAAWA VA PET  + K K+SSD   +G I + IAHDV RTKI HPLF SGGQG+AMLKRVL+RCA+LGAVKEAGYIQGMNYLAGF+LIT AD V++ER+  ++  SR   T          A  DS +                            G          EPT  E+  IE+E V+++ G+IALQGGVLSRDLWGLHANTELVEDLLS+ CPD+M+HLR VNLELIVLTPRWFICIYAGSM++QSVV RIWDLF+WYGRRGPAVLVWVAL VLHGCR+ +FES  LP  VKAVRR+AE CKTFD+LVRQAPVGLN+
Sbjct:  669 WRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPET--YKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGSAAVETEGMGGGAEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNE 1021          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: N6US61_DENPD (Rab-GAP TBC domain-containing protein (Fragment) n=3 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6US61_DENPD)

HSP 1 Score: 61.2 bits (147), Expect = 6.410e-7
Identity = 70/310 (22.58%), Postives = 116/310 (37.42%), Query Frame = 0
Query:   11 NQTVRQALITHGLPPLARRHIWAAWATVAMPETGGHNKVKESSDLIPQGPIASIIAHDVQRTKIGHPLFASGGQGMAMLKRVLLRCADLGAVKEAGYIQGMNYLAGFLLITIADAVVAERDTPETPPSRRSSTGTATLDSPSVXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPTARELEVIESESVEVMLGMIALQGGVLSRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLP---TAVKAVRRH 317
            N T+++  I  G+P   R+  W A +             ++    I    I+  I  D+ RT   +  F +  Q   ML  VL   A   +  E GY QG+NY+AG +L+   D                  T T  L    V                                    ++    V  M G++                + ++V DL+ KH P +  H+  + +   + T +WFICI+A  + +++V+ RIWD   + G +   +L  VAL ++   +  I E+T L    T  K ++ H
Sbjct:   55 NNTMKR-FIRKGIPANLRKTCWMAVSGAEQCRKNSALSYQQLRGKIENSQISETIKIDLPRTFPDNIFFLNEKQLPNMLYNVLATFAHQNS--EVGYCQGLNYIAGLILLVTKD-----------------ETATFWLLKTLVE----------------------------------HLLPKYYVVTMSGLLT---------------DLDVVNDLVQKHEPTVHRHINNIGMPWAMGTTKWFICIFADVLPTETVL-RIWDCLFYEGSK---ILFRVALALIKLHKLEILETTDLSELMTVFKNMKNH 291          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A7J7AW83_9COLE (Rab-GAP TBC domain-containing protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7AW83_9COLE)

HSP 1 Score: 58.9 bits (141), Expect = 2.310e-6
Identity = 31/105 (29.52%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  211 SRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPTAVKAVR 315
            ++ + GL  + E+++D++ K+ P I  H++ V +   V + +WFIC+YA  + +++V+ RIWD   + G +   ++  VAL ++   +R+I E+  L   V   R
Sbjct:  111 AKSMSGLLIDLEVLDDIVQKNEPQIHRHIKNVGMPWAVASTKWFICLYAEVLPTETVL-RIWDCIFYEGSK---IIFRVALTLIKIHKRQILEAKDLGELVSCFR 211          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A023GBI8_AMBTT (Putative ypt/rab gtpase activating protein n=3 Tax=Amblyomma TaxID=6942 RepID=A0A023GBI8_AMBTT)

HSP 1 Score: 57.8 bits (138), Expect = 1.090e-5
Identity = 36/132 (27.27%), Postives = 71/132 (53.79%), Query Frame = 0
Query:  212 RDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWD-LFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPTAVKAVRR-----HAEACKTFDDLVRQAPVGLNQ 337
            R + GL  + E++  L+ +  P++  HL   ++   ++T +WF+C++A  + +++V+ R+WD LFL     G  VL  VAL ++   ++ I  +++L   + A R+     HA  C +F   + + P  L +
Sbjct:  238 RRMTGLLTDIEVLAQLVRERMPEVHAHLAKHDVSWAIVTTKWFVCLFAEVLPTETVL-RVWDCLFL----EGSKVLFRVALTLVSHSQQEILAASNLGEVMTAFRQAASGPHATDCHSFLRAIFREPKSLKR 364          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A1W4XCX1_AGRPL (growth hormone-regulated TBC protein 1 n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XCX1_AGRPL)

HSP 1 Score: 57.4 bits (137), Expect = 1.210e-5
Identity = 32/105 (30.48%), Postives = 59/105 (56.19%), Query Frame = 0
Query:  211 SRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPTAVKAVR 315
            S+++ GL  +  +++ L+ K+ P +  H+ ++ L   V T +WFICIYA  + +++V+ RIWD   + G +   V+  VAL ++   R +I E   +   VK  +
Sbjct:  186 SKNMSGLITDLAVLDKLVQKNEPAVHRHIESIGLPWAVTTTKWFICIYAEVLPTETVL-RIWDSIFYEGSK---VIFRVALTLIKMHRNKILECKDMTELVKCFK 286          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A2A2JTI6_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2JTI6_9BILA)

HSP 1 Score: 58.2 bits (139), Expect = 1.410e-5
Identity = 30/103 (29.13%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  213 DLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPTAVKAVR 315
            +L G  A+ E++++LL ++CP+I +HL ++++EL  +T  WFI ++  ++   +++ R+WD F+     GP VL    L +L   +  I   +     ++ VR
Sbjct:  612 NLAGAQADQEVLKELLEEYCPEIANHLASLDIELASITLNWFIALFFDAVPFSTLL-RLWDCFM---LEGPKVLFHFGLALLIHHKEEILAESDTIGIMRVVR 710          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A1Y2FAY5_9FUNG (RabGAP/TBC n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2FAY5_9FUNG)

HSP 1 Score: 56.2 bits (134), Expect = 4.610e-5
Identity = 27/96 (28.12%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  208 GVLSRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGR-----RGPAVLVWVALGVLHGCR 298
            G  ++DL  L ++ ++   +L +  P I +HL  + ++ I+ T  WF+C+Y+ ++    ++ R+WDLF +YG+      G A+L ++   +L+ C+
Sbjct:  319 GYYTQDLVKLKSDNDIFTKVLKQKLPRIYNHLVDLEIDTILFTTEWFLCLYSKTLPWPCLL-RVWDLFYYYGKPTIIKAGIALLQYIEKPLLNRCQ 413          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A6B2L4B7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4B7_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 5.060e-5
Identity = 58/245 (23.67%), Postives = 98/245 (40.00%), Query Frame = 0
Query:   65 IAHDVQRTKIGHPLFASGGQGMAMLKRVLLRCADLGAVKEAGYIQGMNYLAGFLLITIADAVVAERDTPETPPSRRSSTGTATLDSPSVXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPTARELEVIESESVEVMLGMIALQGGVLSRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSLPT 309
            I  D+ RT   HP+F S  +G   L+R+LL  +      + GY QGMN+LAGFLL+ + +                                                         E   + L +I    VE  +    +       D+ GLHA+  ++  L+    P +  HL+++ L+L V+T RWF+C++  ++   S V RIWD+      +G + ++  A  +L     ++   + L T
Sbjct:   32 IEKDLPRTFPLHPVFISK-EGTDALRRILLAFSIRHP--QIGYTQGMNFLAGFLLLLMEE---------------------------------------------------------ELAFKVLIII----VEYFIPQYYMT------DMPGLHADQMVLAILVRDELPRLHQHLQSLQLDLGVITYRWFLCLFINTLP-YSTVLRIWDILFC---KGTSTIIITAFALLKLMEDKLCSQSFLTT 202          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A0A834M7X4_RHYFE (Rab-GAP TBC domain-containing protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834M7X4_RHYFE)

HSP 1 Score: 55.1 bits (131), Expect = 6.880e-5
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 0
Query:  212 RDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLTPRWFICIYAGSMASQSVVARIWD-LFLWYGRRGPAVLVWVALGVLHGCRRRIFESTSL 307
            + + GL  + E++ +++ KH P I  H+  + +   + T +WFIC+YA  + +++V+ RIWD LFL     G  +L+ VAL +L   +  I +ST L
Sbjct:  186 KTMTGLLCDFEVLNEIVKKHEPLIHRHIHGIGMPWAMGTTKWFICLYADVLPTETVL-RIWDCLFL----EGSKLLIRVALALLKIHKDDILKSTDL 277          
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Match: A4S0J9_OSTLU (Rab-GAP TBC domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0J9_OSTLU)

HSP 1 Score: 55.1 bits (131), Expect = 9.200e-5
Identity = 42/133 (31.58%), Postives = 60/133 (45.11%), Query Frame = 0
Query:    1 WRWVLAQ----RTGNQTVRQALITHGLPPLARRHIWAAWATVAMPETGGHNKVKE---SSDLIPQGPIASI----IAHDVQRTKIGHPLFASGGQGMAMLKRVLLRCADLGAVKEAGYIQGMNYLAGFLLITI 122
            WR  +A     R   + VR     +G+   AR  +W AW+     +       +E   +++L      A+     I  D+ RT   H  FA  G  +  L+RVL   A   A   AGY+QGMNYL GFLL+ +
Sbjct:   43 WRAFVANGRDARARGELVRAFARANGVGREARPRLWFAWSGAEAAKRASDTTYEEYLRAAELSDDAAAATTRDAQIEMDLARTFPEHARFAETGDALPALRRVLRATATSAA---AGYVQGMNYLGGFLLLVM 172          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10894.597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LQ94_ECTSI7.820e-14163.38Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
N6US61_DENPD6.410e-722.58Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A7J7AW83_9COLE2.310e-629.52Rab-GAP TBC domain-containing protein n=1 Tax=Absc... [more]
A0A023GBI8_AMBTT1.090e-527.27Putative ypt/rab gtpase activating protein n=3 Tax... [more]
A0A1W4XCX1_AGRPL1.210e-530.48growth hormone-regulated TBC protein 1 n=1 Tax=Agr... [more]
A0A2A2JTI6_9BILA1.410e-529.13Uncharacterized protein n=1 Tax=Diploscapter pachy... [more]
A0A1Y2FAY5_9FUNG4.610e-528.13RabGAP/TBC n=1 Tax=Neocallimastix californiae TaxI... [more]
A0A6B2L4B7_9EUKA5.060e-523.67Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A834M7X4_RHYFE6.880e-534.02Rab-GAP TBC domain-containing protein n=1 Tax=Rhyn... [more]
A4S0J9_OSTLU9.200e-531.58Rab-GAP TBC domain-containing protein n=1 Tax=Ostr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 19..305
e-value: 6.1E-4
score: 5.0
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 210..300
e-value: 1.1E-11
score: 44.8
coord: 57..124
e-value: 2.1E-7
score: 30.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 22..279
score: 15.677
NoneNo IPR availableGENE3D1.10.472.80coord: 215..333
e-value: 1.2E-16
score: 62.6
NoneNo IPR availableGENE3D1.10.8.270coord: 19..128
e-value: 4.0E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR22957:SF501coord: 211..329
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 59..122
coord: 211..329
NoneNo IPR availablePANTHERPTHR22957:SF501coord: 59..122
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 11..238
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 213..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10894contigS-dermatodea_contig10894:3154..6319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10894.597.1mRNA_S-dermatodea_contig10894.597.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10894 3154..6320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10894.597.1 ID=prot_S-dermatodea_contig10894.597.1|Name=mRNA_S-dermatodea_contig10894.597.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=337bp
WRWVLAQRTGNQTVRQALITHGLPPLARRHIWAAWATVAMPETGGHNKVK
ESSDLIPQGPIASIIAHDVQRTKIGHPLFASGGQGMAMLKRVLLRCADLG
AVKEAGYIQGMNYLAGFLLITIADAVVAERDTPETPPSRRSSTGTATLDS
PSVAAAATLSLELQAAAKDSVMTRGGGGGAGEPTARELEVIESESVEVML
GMIALQGGVLSRDLWGLHANTELVEDLLSKHCPDIMDHLRTVNLELIVLT
PRWFICIYAGSMASQSVVARIWDLFLWYGRRGPAVLVWVALGVLHGCRRR
IFESTSLPTAVKAVRRHAEACKTFDDLVRQAPVGLNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf