prot_S-dermatodea_contig10877.584.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10877.584.1
Unique Nameprot_S-dermatodea_contig10877.584.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length160
Homology
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.370e-53
Identity = 97/149 (65.10%), Postives = 113/149 (75.84%), Query Frame = 0
Query:   11 AVERRVSPLIEEMLGHQGDILEAHRSREMVLSFARERWEEPPPPVEQNLPPVAEYLLGLLGAIDEEGWFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQAL 159
            A ER +S LI  ML HQ D+L  H    ++L  ARERW+ PPPPV+ NL  + E+LLG+LGAIDEEGWFAEPV ESAAPGYI+AILRPMDLGT+R R + R YR V ELQDDL+LVVANC +YN+P T+F  AA SLA QA  AY QAL
Sbjct: 1830 APERPISDLINGMLEHQKDVLARHGKLGVILRLARERWQSPPPPVDANLSALTEHLLGILGAIDEEGWFAEPVSESAAPGYISAILRPMDLGTVRGRLEGRRYRDVAELQDDLLLVVANCFTYNSPGTLFEAAATSLAEQASGAYAQAL 1978          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.970e-35
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 0
Query:   65 YLLGLLGAIDEEGWFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQAL 159
            +LLG+LGAIDEEGWFAEPV E+AAPGYI+AILRPMDLGT+R R + R YR V+ELQDDL+LVVANC +YN+P TMF  AA SLA QA  AY QAL
Sbjct: 1856 HLLGILGAIDEEGWFAEPVSEAAAPGYISAILRPMDLGTVRGRLEGRRYRDVSELQDDLLLVVANCFTYNSPGTMFEAAATSLAEQASGAYAQAL 1950          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: UPI0014039495 (bromodomain-containing protein 1 isoform X1 n=5 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014039495)

HSP 1 Score: 77.4 bits (189), Expect = 1.510e-13
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   55 VEQNLPPVAEYLLGLLGAIDEEGW---FAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            +E  L P+   L  +L  + E+     FA+PV     P Y+  I  PMD  TMR++ +  GY +++E +DD+ L++ NC+ YN  DT+F  AA+ L  Q GV   QA
Sbjct:  599 MELQLTPLTVMLRSILDQLQEKDTAHIFAQPVSLKEVPDYLDHITHPMDFSTMRKKIEDHGYNNLDEFEDDVNLIIDNCMKYNAKDTIFYRAAVRLRDQGGVVLRQA 705          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A3B3ZPQ3_9GOBI (Bromodomain and PHD finger containing, 3a n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZPQ3_9GOBI)

HSP 1 Score: 76.3 bits (186), Expect = 3.620e-13
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   30 ILEAHRSREMVLSFARERWEEPPPPVEQNLPPVAEYLLGLLGAIDEEGW---FAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            ++E  R RE +    RE+ +     +E  L P    L   L  + E+     F++PV  S  P Y+  + +PMDL TMR + +  GY +++ELQ D  L++ANCL YN+ DTMF + A+ +    G  + QA
Sbjct:  539 LIELIRKRERLK---REQMKIQQAALELKLTPALVLLRTTLDQLQEKDTSKIFSQPVNLSEVPDYLEFVSQPMDLATMRSKLEAHGYTTISELQKDFELMIANCLKYNSKDTMFHKTALQMKDVGGAIFRQA 667          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A3B3ZPB9_9GOBI (Bromodomain and PHD finger containing, 3a n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZPB9_9GOBI)

HSP 1 Score: 76.3 bits (186), Expect = 3.800e-13
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   30 ILEAHRSREMVLSFARERWEEPPPPVEQNLPPVAEYLLGLLGAIDEEGW---FAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            ++E  R RE +    RE+ +     +E  L P    L   L  + E+     F++PV  S  P Y+  + +PMDL TMR + +  GY +++ELQ D  L++ANCL YN+ DTMF + A+ +    G  + QA
Sbjct:  557 LIELIRKRERLK---REQMKIQQAALELKLTPALVLLRTTLDQLQEKDTSKIFSQPVNLSEVPDYLEFVSQPMDLATMRSKLEAHGYTTISELQKDFELMIANCLKYNSKDTMFHKTALQMKDVGGAIFRQA 685          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: UPI00145A73F1 (bromodomain and PHD finger-containing protein 3 isoform X1 n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145A73F1)

HSP 1 Score: 76.3 bits (186), Expect = 3.810e-13
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   30 ILEAHRSREMVLSFARERWEEPPPPVEQNLPPVAEYLLGLLGAIDEEGW---FAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            ++E  R RE +    RE+ +     +E  L P    L   L  + E+     F++PV  S  P Y+  + +PMDL TMR + +  GY +++ELQ D  L++ANCL YN+ DTMF + A+ +    G  + QA
Sbjct:  557 LIELIRKRERLK---REQMKIQQAALELKLTPALVLLRTTLDQLQEKDTSKIFSQPVNLSEVPDYLEFVSQPMDLATMRSKLEAHGYTTISELQKDFELMIANCLKYNSKDTMFHKTALQMKDVGGAIFRQA 685          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A2T7NTA0_POMCA (Uncharacterized protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NTA0_POMCA)

HSP 1 Score: 75.1 bits (183), Expect = 9.650e-13
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   74 DEEGWFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAG 152
            D E  FAEPV     P Y+  I  PMD  +MR + D   YRS+++  DD  L+V NC++YN+ DTMF +AA+ L  Q G
Sbjct:  637 DTESIFAEPVSLEEVPDYLDYIKTPMDFSSMRAKVDGHEYRSLDDFHDDFELIVNNCITYNSKDTMFYKAALKLKEQGG 715          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A6J1SXV8_FRAOC (peregrin isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SXV8_FRAOC)

HSP 1 Score: 73.6 bits (179), Expect = 3.320e-12
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   58 NLPPVAEYLLGLLGAI---DEEGWFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            NL P+  ++  LL AI   D    F EPV ++  P Y   +  PMDL TMR + D   Y+++++   D +L+V+NCL+YN+ +T+F  A + +  Q G    QA
Sbjct:  658 NLAPLQNFMRNLLDAIQARDTGNIFGEPVDQNEVPDYSDVVKEPMDLSTMRTKLDSYEYQTLDDFHRDFMLMVSNCLAYNSKETVFYRAGVKMRDQGGALIRQA 761          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: UPI0015B0851C (bromodomain and PHD finger-containing protein 3 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B0851C)

HSP 1 Score: 73.2 bits (178), Expect = 4.530e-12
Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = 0
Query:   55 VEQNLPPVAEYLLGLLGAIDEEG---WFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISL 147
            +E  L P    L   L  + E+     FA+PV     P Y+  I +PMD  TMR R +  GYRS+ EL+ D  L+VANCL YN+ DT+F  AA+ L
Sbjct:  651 LEMQLTPALVLLRSTLDQLQEKDPAQIFAQPVNLKEVPDYLEFISQPMDFSTMRSRLEAHGYRSLAELEGDFNLMVANCLRYNSRDTVFHRAAVRL 746          
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Match: A0A226E7G8_FOLCA (Peregrin n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226E7G8_FOLCA)

HSP 1 Score: 72.0 bits (175), Expect = 1.140e-11
Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 0
Query:   30 ILEAHRSREMVLSFARERWEEPPPPVEQNLPPVAEYLLGLLGAIDEEGWFAEPVLESAAPGYIAAILRPMDLGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQAGVAYGQA 158
            I +  + +  +++   E W     P  Q L  V    L  +G  D +  FAEPV   A P Y   I  PMDL TMR+RA +  Y S+NE++ D  L++ NCL YN+ +T+F    + L     + + +A
Sbjct:  549 IRKREKQKRELVALRTEEWSFKTVPFVQLLLSV----LNEIGGRDPQNIFAEPVDAEAVPDYHTVIHSPMDLSTMRQRAQQLHYDSLNEMKKDFQLMINNCLLYNSKETIFHRTGLRLQESGSMIFREA 673          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10877.584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE1.370e-5365.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP1_ECTSI1.970e-3573.68WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
UPI00140394951.510e-1337.38bromodomain-containing protein 1 isoform X1 n=5 Ta... [more]
A0A3B3ZPQ3_9GOBI3.620e-1334.85Bromodomain and PHD finger containing, 3a n=1 Tax=... [more]
A0A3B3ZPB9_9GOBI3.800e-1334.85Bromodomain and PHD finger containing, 3a n=3 Tax=... [more]
UPI00145A73F13.810e-1334.85bromodomain and PHD finger-containing protein 3 is... [more]
A0A2T7NTA0_POMCA9.650e-1345.57Uncharacterized protein n=4 Tax=Pomacea canalicula... [more]
A0A6J1SXV8_FRAOC3.320e-1236.54peregrin isoform X1 n=2 Tax=Frankliniella occident... [more]
UPI0015B0851C4.530e-1242.71bromodomain and PHD finger-containing protein 3 n=... [more]
A0A226E7G8_FOLCA1.140e-1133.33Peregrin n=2 Tax=Folsomia candida TaxID=158441 Rep... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 104..122
score: 22.77
coord: 88..104
score: 44.37
coord: 122..141
score: 33.37
IPR001487BromodomainSMARTSM00297bromo_6coord: 55..160
e-value: 1.8E-14
score: 64.0
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 77..144
e-value: 1.4E-15
score: 57.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 79..141
score: 14.845
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 57..159
e-value: 1.4E-22
score: 81.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 50..149
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 56..152
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 56..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10877contigS-dermatodea_contig10877:6553..7032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10877.584.1mRNA_S-dermatodea_contig10877.584.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10877 6553..7032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10877.584.1 ID=prot_S-dermatodea_contig10877.584.1|Name=mRNA_S-dermatodea_contig10877.584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=160bp
GGGSDGRGGGAVERRVSPLIEEMLGHQGDILEAHRSREMVLSFARERWEE
PPPPVEQNLPPVAEYLLGLLGAIDEEGWFAEPVLESAAPGYIAAILRPMD
LGTMRRRADRRGYRSVNELQDDLVLVVANCLSYNTPDTMFAEAAISLARQ
AGVAYGQALG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf