prot_S-dermatodea_contig1084.568.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1084.568.1
Unique Nameprot_S-dermatodea_contig1084.568.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length491
Homology
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BLAST of mRNA_S-dermatodea_contig1084.568.1 vs. uniprot
Match: A0A6H5L4Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q4_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.740e-19
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:  327 DTLESLLYAGNHLAADVLTDMERSKGRTKRSVRELVGQVKRTTDVRDFLDKSTGVTKLTEHTGVSQGATPSQRLAPGQETSVQISLGRKDSIVGSIMV 424
            +TL  LL   NHL+AD L +++ +  R KR VR+LVGQV+R+ D ++FL K     + T+  GV  G  PS +LAPGQETS+Q+S GRKD+I+GSI V
Sbjct:    9 NTLGILLCQDNHLSADTLIEIDYAMARPKRPVRDLVGQVQRSIDTQNFLSKGVETGQQTKVAGVPHGGEPSVQLAPGQETSIQVSFGRKDNIIGSIPV 106
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BLAST of mRNA_S-dermatodea_contig1084.568.1 vs. uniprot
Match: A0A8C5LMS7_JACJA (Ribonuclease inhibitor n=2 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5LMS7_JACJA)

HSP 1 Score: 62.4 bits (150), Expect = 1.040e-6
Identity = 52/152 (34.21%), Postives = 70/152 (46.05%), Query Frame = 0 
Query:    2 RDLSRAWSEDQNLTKLNLAANNIGVAGVAALVGAL---GSSLSISSVD-CSRNPA------------------------LGDEGARLLVPALCTDGTGVSTIRILSLMRCGIGDTGATALARGLRGNSVLEALKLTGNCIGDSGVISLMDSL 125
            RDL R      NL +L+LA N +G  G   L  +L   G  L +  V  CS  PA                        LGD G + L  AL   GT    +R+L L  C + D G ++LAR L  N  L+ L L+ NC+GD G++ LM++L
Sbjct:  305 RDLCRVLRSKSNLKELSLANNELGDEGARLLCESLLEPGCQLELLWVKTCSLTPACCSHFRSMLAQNRSLLELQMSSNPLGDSGVQELCEALSQPGT---VLRVLCLGDCDVTDAGCSSLARVLLANHTLQELDLSNNCMGDLGILQLMENL 453
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BLAST of mRNA_S-dermatodea_contig1084.568.1 vs. uniprot
Match: UPI0020146A9F (NACHT, LRR and PYD domains-containing protein 12-like isoform X1 n=7 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020146A9F)

HSP 1 Score: 58.5 bits (140), Expect = 2.480e-5
Identity = 48/114 (42.11%), Postives = 59/114 (51.75%), Query Frame = 0 
Query:   14 LTKLNLAANNIGVAGVAALVGALGSSLSISSVDCSRNPALGDEGARLLVPALCTDGTGVSTIRI--LSLMRCGIGDTGATALARGLRGNSVLEALKLTGNCIGDSGVISLMDSL 125
            L KL L   NI   G AAL  AL S+  +  +D S N  +GD+G  LL     +DG      ++  L+L  C I D G  AL   LR NS L  L LTGN IGD G++ L D L
Sbjct:  823 LEKLTLRDCNITAEGCAALTSALRSNSHLRELDLSGNK-IGDKGLTLL-----SDGLKDPQCKLEKLTLFECNIIDEGVAALTSALRSNSHLRELVLTGNKIGDEGLMLLSDGL 930
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BLAST of mRNA_S-dermatodea_contig1084.568.1 vs. uniprot
Match: A0A7J6DG74_9TELE (NACHT domain-containing protein n=1 Tax=Onychostoma macrolepis TaxID=369639 RepID=A0A7J6DG74_9TELE)

HSP 1 Score: 56.6 bits (135), Expect = 9.850e-5
Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 0 
Query:   28 GVAALVGALGSSLSISSVDCSRNPALGDEGARLLVPALCTDGTGVSTIRI--LSLMRCGIGDTGATALARGLRGNSVLEALKLTGNCIGDSGVISLMDSLVGLSRSFLTEMWLSSNRVGSVGAEGIAAVLAKAPTLR 162
            G AAL  AL S+  +  +D + N  LGD G  L+     +DG      ++  L+L  CG+ D G  AL+  LR NS L  L L+GN +GD+G+  + D L    R  L ++WLS   V   G   +++ L     LR
Sbjct:  882 GCAALSSALRSNSHLRELDLTGNK-LGDAGLMLI-----SDGLKDPRCKLEKLTLWSCGVTDEGCAALSSALRSNSHLRELDLSGNKLGDAGLKLISDGLKD-PRCKLEKLWLSYCGVTDEGCAALSSALRSNSHLR 1011
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1084.568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L4Q4_9PHAE1.740e-1951.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8C5LMS7_JACJA1.040e-634.21Ribonuclease inhibitor n=2 Tax=Jaculus jaculus Tax... [more]
UPI0020146A9F2.480e-542.11NACHT, LRR and PYD domains-containing protein 12-l... [more]
A0A7J6DG74_9TELE9.850e-535.04NACHT domain-containing protein n=1 Tax=Onychostom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 186..213
e-value: 0.099
score: 21.8
coord: 242..269
e-value: 1.2
score: 16.5
coord: 100..127
e-value: 1.0
score: 17.1
coord: 72..99
e-value: 2.0
score: 15.1
coord: 214..241
e-value: 0.099
score: 21.8
coord: 11..38
e-value: 0.65
score: 18.5
coord: 270..297
e-value: 0.53
score: 19.1
coord: 158..185
e-value: 2.6
score: 14.2
coord: 298..325
e-value: 1.7
score: 15.5
coord: 130..157
e-value: 1.7
score: 15.5
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 189..343
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 133..213
coord: 7..174
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 189..343
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 133..213
coord: 7..174
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..354
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 273..292
e-value: 0.99
score: 9.6
coord: 11..32
e-value: 0.025
score: 14.6
coord: 100..122
e-value: 3.7E-4
score: 20.3
coord: 187..208
e-value: 0.34
score: 11.1
coord: 215..236
e-value: 0.0072
score: 16.3
coord: 159..179
e-value: 0.064
score: 13.3
coord: 73..94
e-value: 0.0026
score: 17.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 71..184
e-value: 4.9E-25
score: 89.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 185..362
e-value: 4.4E-34
score: 119.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..70
e-value: 7.1E-10
score: 40.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1084contigS-dermatodea_contig1084:347..9277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1084.568.1mRNA_S-dermatodea_contig1084.568.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1084 347..9277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1084.568.1 ID=prot_S-dermatodea_contig1084.568.1|Name=mRNA_S-dermatodea_contig1084.568.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=491bp
VRDLSRAWSEDQNLTKLNLAANNIGVAGVAALVGALGSSLSISSVDCSRN
PALGDEGARLLVPALCTDGTGVSTIRILSLMRCGIGDTGATALARGLRGN
SVLEALKLTGNCIGDSGVISLMDSLVGLSRSFLTEMWLSSNRVGSVGAEG
IAAVLAKAPTLRELHISGNALGDLAGAALVKAAVAGRHLRGLYIGGCGVG
DTGAKEIANALQNSLRLETLSLGHGSIGDDGASALARALAENRALRRLLL
PANHLRAAGGKAMAGMLLSNEALFCLDVSNNHLGAIGIEAVATAIAKNRS
LLELDLSGCGGTDASFRAVARAVEANDTLESLLYAGNHLAADVLTDMERS
KGRTKRSVRELVGQVKRTTDVRDFLDKSTGVTKLTEHTGVSQGATPSQRL
APGQETSVQISLGRKDSIVGSIMVTKDTCLDEARTLIDTLLRPSERNAFH
FMSLTGGVIPLEDEQARRVVWDCEVPVRLRPSSWVSIGQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf