prot_S-dermatodea_contig10808.548.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10808.548.1
Unique Nameprot_S-dermatodea_contig10808.548.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length958
Homology
BLAST of mRNA_S-dermatodea_contig10808.548.1 vs. uniprot
Match: A0A6H5L4K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K7_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.990e-28
Identity = 138/362 (38.12%), Postives = 160/362 (44.20%), Query Frame = 0
Query:  669 KVRGLGVVAVAQGSTADNRSEVMAGAAALEKRRRAEGRMSCKAEPPAMPPMDEE---------------SDDEDI----GVDFGDFGVQRRTI---EEXXXXXEAVE----VDGWGPRSDTGPVAGGWDDCDGEGTSSGSCTGTISS-VDQRPPGG-------------------------------WSGASSALSASSAE-------------EXXXXXXXSASGSGPGS-TISVSEGSEEG--DAAWPVDLRSSVGVVTDLVLPCHSAVIGVAKCAASAVAGTGRAANGCVFGGEESXXXXXXXXXXEMAAALEAIYEQGRRQLNQHAERSARGARQRATDAWLATRTPQQQNAYLERTQ 956
            K RGL VV    G+T DNR EV+  A +LEK+RR EGR +   +    PP   +                  ED+    GVD G F  Q+R     EE     E V     VDGWGPR DTGPV GGW DC         C   ++S VD+                                    W    S+ S S                 XXX    S SG    S  +S  E  EEG  +A W  +L+SSVGVVTDLVLPC            + V G G A       GEE           EMAAALEAIYE+GR QL +HAE   + ARQRATDAWLA+RTPQQQN Y ERTQ
Sbjct:  315 KPRGLKVVLQPLGATPDNRLEVLKLAPSLEKKRRMEGRFAVPQQHQEAPPPSPDLAGSCXXXXXXXXXXXXKEDVEAVTGVDLGCFRAQKRQQRQDEETNRKQEVVAAGAGVDGWGPRQDTGPVEGGWGDC---------CIPAVASAVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEATESSTSLSGGAGDWGIASGRXXXXXXXXVCGVSESGXXXXSMAVSTDEQGEEGQEEARWAEELKSSVGVVTDLVLPCQGRD-------GAGVDGVGIAIEEV---GEEGEGHEDER---EMAAALEAIYEKGREQLERHAEVHGKEARQRATDAWLASRTPQQQNDYRERTQ 654          
BLAST of mRNA_S-dermatodea_contig10808.548.1 vs. uniprot
Match: D7FXG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG8_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.990e-21
Identity = 125/337 (37.09%), Postives = 147/337 (43.62%), Query Frame = 0
Query:  691 MAGAAALEKRRRAEGRMSCKAE----PPAMPPM---------------DEESDDEDIGVDFGDFGVQRR-------TIEEXXXXXEAVEVDGWGPRSDTGPVAGGWDDCDGEGTSSGSCTGTISSVDQRPPGGWSGASSALSASSAEEXXXXXXX------------------------------------------SASGSGPGS-TISVSEGSEEG--DAAWPVDLRSSVGVVTDLVLPCHSAVIGVAKCAASAVAGTGRAANGCVFGGEESXXXXXXXXXXEMAAALEAIYEQGRRQLNQHAERSARGARQRATDAWLATRTPQQQNAYLERTQ 956
            MA A +LEK+RR EGR +   +    PP  P +                +E  +   GVD G F  Q++       T  +       V VDGWGPR DTGPV GGW DC         C   ++                        XXXXXXX                                          S SGS   S  +S  E  EEG  +A W  +L+SSVGVVTDLVLPC            + V G G A      GGEE XXX       EMAAALEAIYE+GR QL +HAE   + ARQRATDAWLA+RTPQQQ+ Y ERTQ
Sbjct:    1 MALAPSLEKKRRMEGRFAVAQQHQEAPPPSPDLAGSCGGAXXXXXXXXXKEDVEAATGVDLGCFRAQKQQQRQEVETKRKEEVVAADVAVDGWGPRQDTGPVEGGWGDC---------CIPAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCGVSESGSXXXSMAVSTDEQGEEGQEEARWAEELKSSVGVVTDLVLPCQGRD-------GAGVDGVGIAIE---EGGEEEXXXEDER---EMAAALEAIYEKGREQLKRHAEVHGKEARQRATDAWLASRTPQQQSDYRERTQ 315          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10808.548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4K7_9PHAE3.990e-2838.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXG8_ECTSI3.990e-2137.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availableCOILSCoilCoilcoord: 906..926
NoneNo IPR availableCOILSCoilCoilcoord: 227..249
NoneNo IPR availablePANTHERPTHR23196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINcoord: 153..440
NoneNo IPR availablePANTHERPTHR23196:SF1PAX-INTERACTING PROTEIN 1coord: 153..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10808contigS-dermatodea_contig10808:341..4323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10808.548.1mRNA_S-dermatodea_contig10808.548.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10808 341..4323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10808.548.1 ID=prot_S-dermatodea_contig10808.548.1|Name=mRNA_S-dermatodea_contig10808.548.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=958bp
REGGVSVPAYRQQGAVVAGVGIENRWPPLVASARNGATPAAVQVVSVPGA
PTVIPPTATAPAVVPPPATIAPLDAREKAVPSPVPRRVPRSLSCDGWVEP
ACGARPGLSPTMSDDVHYRDHGRPAAHVTTPVSASGRPCGKSPPSRKPPS
PSTPRSRRRGEDWDRMSSTPPPPPPPPPPPPLAAGMATSPQQQQQQQPVQ
PSHAHLRPRYPPWEAVVHISPGSPPRHQRQQQQQQQQQQQQHQQQQQQQQ
QHQLRQRQVGGQYETLYWRPAPAPGTHGVQHRPLHVILTHAEHQMILQHQ
QQQQREQYQKHMQHQQREQLHQREHQLHHREREQQREQQQQQQQREQPQP
QPQPREAPPPREQPLQREPLKPREQQQQQQQQPPPQPPQQHRDQHRDQQR
GRPRVEVGRNAAQASAGRRPSPAPQEASRRPLSPPPSSMGRSGAAAAGEW
QRQHPMKGGGVQHRSSARPVYYPPPGSAAAAAAGAGGGIPAVSVIGPAGY
HPHPESGGHAMHLALPPGGMPLLSIVAQAPFAPYAVLMPVPRRSVNGVGA
NGTTSAAPSANGSVNGTALPPPPPPPPPAAAVVAAAAATAAAAAAAAAAA
ATAGAGGTGGGANGIANGGASVANGGSSGSGGGHSKGGGSGGGGGGTTHF
RVRVHAPPPPAESRYLQPKVRGLGVVAVAQGSTADNRSEVMAGAAALEKR
RRAEGRMSCKAEPPAMPPMDEESDDEDIGVDFGDFGVQRRTIEEEEEEEE
AVEVDGWGPRSDTGPVAGGWDDCDGEGTSSGSCTGTISSVDQRPPGGWSG
ASSALSASSAEEPGAWGGGSASGSGPGSTISVSEGSEEGDAAWPVDLRSS
VGVVTDLVLPCHSAVIGVAKCAASAVAGTGRAANGCVFGGEESDDDGDEE
EEREMAAALEAIYEQGRRQLNQHAERSARGARQRATDAWLATRTPQQQNA
YLERTQR*
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