prot_S-dermatodea_contig10793.532.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10793.532.1
Unique Nameprot_S-dermatodea_contig10793.532.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length116
Homology
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BLAST of mRNA_S-dermatodea_contig10793.532.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.060e-53
Identity = 94/113 (83.19%), Postives = 99/113 (87.61%), Query Frame = 0 
Query:    1 RSSLYPLCPLSKLAEIGVMGAASSVCNTVGAFETALDLLRSDIVHLCVEGAKVPVDRLWPAEALLLNLWELQQHAISELRSSSPMVDVPLPMPRDPEERAEGSQHAL--RGGA 111
            RSS YPLCPLSKLAEIGVMGAAS+VC T+GAF+TALDLLR+DIVHLCVEGA VPVD LWPAEALLLNLWELQQHA+SELRSSSPMVDVPLPMPRDP E      H L  RGGA
Sbjct:  296 RSSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQHAMSELRSSSPMVDVPLPMPRDPPEPKSAGFHRLGSRGGA 408
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BLAST of mRNA_S-dermatodea_contig10793.532.1 vs. uniprot
Match: A0A835Z9D6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.470e-22
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0 
Query:    2 SSLYPLCPLSKLAEIGVMGAASSVCNTVGAFETALDLLRSDIVHLCVEGAKVPVDRLWPAEALLLNLWELQQHAISELRSSSPMVDV 88
            S  YPLCP   +AE GV+G  +   ++  AFETALD+LRS++V LCV+GA VPVDRLWPAEALLLNLWEL +H   +L +S+  ++ 
Sbjct:  191 SEEYPLCPPHTVAEGGVIGGKAY--SSESAFETALDMLRSNVVTLCVQGAGVPVDRLWPAEALLLNLWELHKHVGQQLAASTAALET 275
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10793.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT64_ECTSI1.060e-5383.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9D6_9STRA4.470e-2256.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10793contigS-dermatodea_contig10793:4266..7238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10793.532.1mRNA_S-dermatodea_contig10793.532.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10793 4266..7238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10793.532.1 ID=prot_S-dermatodea_contig10793.532.1|Name=mRNA_S-dermatodea_contig10793.532.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=116bp
RSSLYPLCPLSKLAEIGVMGAASSVCNTVGAFETALDLLRSDIVHLCVEG
AKVPVDRLWPAEALLLNLWELQQHAISELRSSSPMVDVPLPMPRDPEERA
EGSQHALRGGARQSSS
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