prot_S-dermatodea_contig10576.401.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10576.401.1
Unique Nameprot_S-dermatodea_contig10576.401.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length144
Homology
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BLAST of mRNA_S-dermatodea_contig10576.401.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.480e-28
Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 0 
Query:    5 EPPSVEREAALMEMKTDNDVDEDGNLVLHTFWDKAGAPRMGQDAVINTERFWEVMSSHFAEDHKDGWLQRLATFEHLPKGDDDPVFVVPEP--------------SKGDKAKQKMG 106
            EP  V++  ALM  K D D+D+DGNLVLHTFWDKAGAPR+GQ++ +  ERFWEVM+ +F E H  GWL +L   EHLPK +DDP +V+PEP              ++GD AKQ  G
Sbjct:  302 EPDCVDKPGALMGRKADPDIDDDGNLVLHTFWDKAGAPRIGQES-LTCERFWEVMAGYFPEGHSPGWLGKLLDIEHLPK-EDDPAYVIPEPRQKXXXXXXXXXXXTEGDNAKQPKG 415
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10576.401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV42_ECTSI1.480e-2852.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10576contigS-dermatodea_contig10576:182..4170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10576.401.1mRNA_S-dermatodea_contig10576.401.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10576 182..4170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10576.401.1 ID=prot_S-dermatodea_contig10576.401.1|Name=mRNA_S-dermatodea_contig10576.401.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=144bp
EETEEPPSVEREAALMEMKTDNDVDEDGNLVLHTFWDKAGAPRMGQDAVI
NTERFWEVMSSHFAEDHKDGWLQRLATFEHLPKGDDDPVFVVPEPSKGDK
AKQKMGAKDGSVVDGGDSDGSISMDDVMDVDIDEEDEDDYNRRR
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