prot_S-dermatodea_contig10565.394.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10565.394.1
Unique Nameprot_S-dermatodea_contig10565.394.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length456
Homology
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BLAST of mRNA_S-dermatodea_contig10565.394.1 vs. uniprot
Match: D8LND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND3_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 8.460e-12
Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:  395 EDEEDPSVDDNGFVLKVAGGMTALVGLIAVGVWTVNRRRTSRLRGEFQGVRHRGLEEADNL 455
            ++EEDPSVDDN FVLK   G+  LV + AVGV+ + RRRT  LRGEFQGV HRGL + D+L
Sbjct:  280 DEEEDPSVDDNSFVLKFGAGLMVLVAIGAVGVFVMRRRRTQGLRGEFQGVPHRGLTDEDSL 340
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BLAST of mRNA_S-dermatodea_contig10565.394.1 vs. uniprot
Match: A0A6H5KT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT56_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 4.100e-8
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0 
Query:  395 EDEEDPSVDDNGFVLKVAGGMTALVGLIAVGVWTVNRRRTSRLRGEFQGVRHRGLEEADNL 455
            ++E+DPSVDDN +VLK    +  LV + A GV+ + RRR   LRGEFQGV HRGL + D+L
Sbjct:  445 DEEKDPSVDDNSYVLKFGAVLMVLVAVGAAGVFVMRRRRIQGLRGEFQGVPHRGLTDEDSL 505
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10565.394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LND3_ECTSI8.460e-1262.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT56_9PHAE4.100e-854.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 430..455
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..429
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..406
NoneNo IPR availableTMHMMTMhelixcoord: 407..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10565contigS-dermatodea_contig10565:4339..6188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10565.394.1mRNA_S-dermatodea_contig10565.394.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10565 3364..6251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10565.394.1 ID=prot_S-dermatodea_contig10565.394.1|Name=mRNA_S-dermatodea_contig10565.394.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=456bp
MGRRLEGSAGGTSSSTSADDSTTDDATIDPDGSTDVDDSFQDVATEPPAG
MSLSSNSSSSTDAASSSGSLVGEGSGGLDGGSSNSTGIDSSNSTTLDSST
TGGSVVDGSSSSSNSTTDVVSSSSNSSSSSSATDVVSSSNNSSSSSSSSS
ATDVLSSNNNSSSSSSVTDSSSTNSSSSSLEEVFDGTQPPEGGSSSSNST
AVDSSSGTTVDNSNSTAVVDSSTADGSEVDSSSSNSTASSSLDRVPEASQ
APESVNSTYAPTSSSNTSAADRNEENTPTLTPTTSSTHPPGSTEVTSSAS
EAPVEQPSTASSPTSTESGYTDDREAGGWEESTSYGDDGIEEAYEEYMEE
EYGYGDDQVGHETEEAEEGRHQYGYEDGEGGGEQQGQYGDFDEGEDEEDP
SVDDNGFVLKVAGGMTALVGLIAVGVWTVNRRRTSRLRGEFQGVRHRGLE
EADNL*
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