prot_S-dermatodea_contig1054.376.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1054.376.1
Unique Nameprot_S-dermatodea_contig1054.376.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length194
Homology
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 4.520e-108
Identity = 167/195 (85.64%), Postives = 178/195 (91.28%), Query Frame = 0
Query:    1 MSIREGQWQSKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFGD-RHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV 194
            M+IREG WQSKND++FILRSLR GRR+DGR LGDMRLLRM+FARAEGQASAEIQLGRTR L VVTGEVVPPFPDRP EGFLHFNVELG MAA S G+ R+SPLSVEI RVIE+ VRDSQALDTEALCIIGGEK   LRCDVH+LDHGGNLIDAC LATMAALRHFRRPEVTV+GS V+VHHTDDKEPHPLALHHV
Sbjct:    1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRPEVTVDGSKVVVHHTDDKEPHPLALHHV 192          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 8.200e-102
Identity = 150/169 (88.76%), Postives = 157/169 (92.90%), Query Frame = 0
Query:    1 MSIREGQWQSKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFGD-RHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPE 168
            M+IREG WQSKNDHDFILRSLR GRR DGR+LGDMRLLRM+FARAEGQASAEIQLGRTR L VVTGEVVPPFPDRPTEGFLHFNVELG MAA S G+ R+SPLSVEI RVIE+ VRDSQALDTEALCIIGGEKVWQLRCDVH+LDHGGNLIDAC LATMAALRHFRRPE
Sbjct:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRPE 169          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.830e-69
Identity = 120/197 (60.91%), Postives = 148/197 (75.13%), Query Frame = 0
Query:    1 MSIREGQWQSKNDHDFILRSLRQGR-RIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFGD-RHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSS-VLVHHTDDKEPHPLALHHV 194
            M+IR+G   + N + F+L +LR G+ RIDGR L  +R +   F R+EGQAS  +Q GRT+ LAVV+ EVVPP+PDRPT+G L FNVEL  MA  S G  R SPL+ EI R+IE  +RDSQALDTE LCI+ GEKVWQLR DVH+LD+GGNL+DA  LA +AAL+HFRRP+VTV G   V VHH+D++E  PLALHHV
Sbjct:    1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRPDVTVSGEGFVEVHHSDEREAQPLALHHV 197          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.740e-64
Identity = 103/185 (55.68%), Postives = 134/185 (72.43%), Query Frame = 0
Query:   10 SKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSF-GDRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHH 193
            S  + DFI  +LR GRR+DGR L D R +   F R   + +AE++LG+TR + V T EVVPP+PDRPTEGFL FNVEL  MA+  F   R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV V+D GGN+IDA  L+ +A+L HFRR +V+V G  V +H  DD+ P PL++HH
Sbjct:    4 SNVERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAGRPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRRADVSVSGDRVTIHSFDDRVPVPLSVHH 188          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 206 bits (523), Expect = 7.110e-61
Identity = 104/198 (52.53%), Postives = 143/198 (72.22%), Query Frame = 0
Query:    1 MSIREG-QWQSKNDHDFILRSLRQGRRI--DGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFG-DRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV 194
            M+IRE   + S+N+  F+  S+     I  DGR L   R +R+ F R + Q+ AE+QLGRTR +A V GE+VPPFPDRPTEGFLHF+VEL  MA+ +F   R SPL+VE+ R+++  +R+ +ALDTEAL I+ GEKVW + C++HV+DHGGNLID  +LA +AA+ HFRRPEV+V+G++  V+  DD    PL+LHH+
Sbjct:    1 MAIREEYDFVSENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRPEVSVQGNATTVYRIDDHAAVPLSLHHI 198          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 205 bits (521), Expect = 1.960e-60
Identity = 103/198 (52.02%), Postives = 144/198 (72.73%), Query Frame = 0
Query:    1 MSIREGQ-WQSKNDHDFILRSLRQGR--RIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFG-DRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV 194
            M+IRE   + S+N+  F+  S+      R DGR L   R +R+ F R E Q+ AE+QLGRTR +A V GE+VPPFPDRPTEGFLHFNVEL  MA+ +F   R SP++VE+ R+++  +R+ +ALDTEAL II GEKVW + C++HV+DHGGNLID  +LA +AA+ H+RRPE++V+ +S +V++ D+    PL+LHH+
Sbjct:    1 MAIREEHDFLSENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRPEISVQKNSTIVYNIDEHAAVPLSLHHI 198          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 204 bits (519), Expect = 3.120e-60
Identity = 102/198 (51.52%), Postives = 142/198 (71.72%), Query Frame = 0
Query:    1 MSIREGQ-WQSKNDHDFILRSLRQGRRI--DGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFG-DRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV 194
            M+IRE   + S+N+  F+  S+     I  DGR L   R +R+ F R + Q+ AE+Q+GRTR +A V GE+VPPFPDRPTEGFLHFNVEL  MA+ +F   R SPL++E+ R+++  +R+ +ALDTEAL I+ GEKVW + C +HV+DHGGNLID  +LA +AA+ H+RRPEV+V+GS+  V+  D+    PL+LHH+
Sbjct:    1 MAIREEHDFLSENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRPEVSVQGSTTTVYRIDEHAAVPLSLHHI 198          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A1Y2GNW0_9FUNG (Ribosomal protein S5 domain 2-type protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GNW0_9FUNG)

HSP 1 Score: 194 bits (492), Expect = 1.330e-58
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 0
Query:   10 SKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFG-DRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV 194
            S N+ +F+L +LR G RIDGR   D R LR+ F    G  + E+QLG TR LA V+ EV+ PFPD+PTEGFL FN EL  MA+P+F   R +   V + R+IE A++ S+ALDTE LCI+ GEKVW +R D+H LDH GNL+DA  +A + AL+HFRRP+VTV G  V +H  + + P PL++HH+
Sbjct:    7 STNEREFVLAALRDGARIDGRNFYDFRTLRLSFGADYG--AVEVQLGNTRVLAKVSCEVIRPFPDKPTEGFLMFNTELSPMASPAFEVGRQTDEEVLVSRLIEKAMKRSRALDTEGLCIVAGEKVWSIRVDIHFLDHDGNLVDAACIAAITALQHFRRPDVTVVGEDVTIHTLEQRNPVPLSIHHI 190          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A2P6N4M7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N4M7_9EUKA)

HSP 1 Score: 191 bits (484), Expect = 4.410e-57
Identity = 97/185 (52.43%), Postives = 124/185 (67.03%), Query Frame = 0
Query:   10 SKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFGD-RHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHH 193
            S N+  FI   LR+  R+DGRR  DMR L + F         E+QLG TR L  V  ++V PFP+RPTEGF HFNVE   MA P+F   + S   +E+ RV+E  +R+S+A+D+EALCII  EKVW +RCD+H+LDH GNL D  ++AT+AAL HFRRP  TV GS V VH   +KEP PL++HH
Sbjct:   13 SLNESKFITEGLRENLRVDGRRPHDMRRLNINFDSGV-TGHVEVQLGGTRVLTSVRADIVEPFPERPTEGFFHFNVEFSPMADPNFEQGKQSDQFIELGRVVERGLRESRAIDSEALCIIASEKVWSVRCDIHILDHVGNLTDCASIATIAALMHFRRPSTTVTGSQVTVHPPGEKEPVPLSIHH 196          
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Match: A0A3M6VKF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKF7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 4.700e-57
Identity = 104/200 (52.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:   10 SKNDHDFILRSLRQGR--RIDGRRLGDMRLLRMLFARAEGQASAEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSF--------GDRHSPLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLIDACNLATMAALRHFRRPEVTV-EGSS----VLVHHTDDKEPHPLALHHV 194
            S+N+  F+   LRQ    R DGR L   R +R+ F R+E ++ AE+QLGRTR +  V GE+VPPFPDRPTEGFLHF+VEL  MA+PSF        G   S ++ E+ R++E  VR+S+ALDTEAL ++ GEKVW + C VHV+DHGGNL+DA +LA +AAL H+RRPEV V EG+     V V+  D+    PL+LHH+
Sbjct:   11 SENERQFLANCLRQSPHVRADGRELLQQRKIRVQFRRSESESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFSVELSPMASPSFDASSSASRGAASSVVAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRPEVAVKEGTGGIGGVTVYSVDEYAAVPLSLHHI 210          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1054.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDM4_9PHAE4.520e-10885.64RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
D7G4N5_ECTSI8.200e-10288.763'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar... [more]
A0A835ZEC1_9STRA3.830e-6960.91Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S1CIZ9_9STRA2.740e-6455.68Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8K1C7Y8_PYTOL7.110e-6152.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X4Z2_GLOUD1.960e-6052.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4C8I4_PYTIN3.120e-6051.52Exosome complex exonuclease RRP45-like protein n=1... [more]
A0A1Y2GNW0_9FUNG1.330e-5852.15Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A2P6N4M7_9EUKA4.410e-5752.43Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A3M6VKF7_9STRA4.700e-5752.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 7..194
e-value: 7.4E-61
score: 208.0
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 49..167
e-value: 1.0E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 10..194
NoneNo IPR availablePANTHERPTHR11097:SF14EXOSOME COMPLEX COMPONENT RRP45coord: 10..194
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 8..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1054contigS-dermatodea_contig1054:7464..20417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1054.376.1mRNA_S-dermatodea_contig1054.376.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1054 7464..20417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1054.376.1 ID=prot_S-dermatodea_contig1054.376.1|Name=mRNA_S-dermatodea_contig1054.376.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
MSIREGQWQSKNDHDFILRSLRQGRRIDGRRLGDMRLLRMLFARAEGQAS
AEIQLGRTRALAVVTGEVVPPFPDRPTEGFLHFNVELGSMAAPSFGDRHS
PLSVEIVRVIEVAVRDSQALDTEALCIIGGEKVWQLRCDVHVLDHGGNLI
DACNLATMAALRHFRRPEVTVEGSSVLVHHTDDKEPHPLALHHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold