prot_S-dermatodea_contig105.355.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig105.355.1
Unique Nameprot_S-dermatodea_contig105.355.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length338
Homology
BLAST of mRNA_S-dermatodea_contig105.355.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 3.040e-113
Identity = 186/277 (67.15%), Postives = 212/277 (76.53%), Query Frame = 0
Query:   66 VASSRILLPSLVFHVLVFLCLATEVPVYACRYASGGGFCSVG-----RPLYALHLASYLLLFNAFCVIVTLWSDVAVFEPNEWTVLMNSRSMLVLCLCYLLVTAVAVSVCLGLGGVKYFFSSTVFLLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVAGSCTATTTARVVRLNVVMLACFVCFTMRAFMLAALVEVQAEGEIDRNFGMGWEKWEWDMRMEWAPHVIPCVAMLYLMRNSGEPASGGSEEARH-------NDEKTELGSVETSGGYG 330
            VASSR+++PSL+FHVLVFLCLA EVPVYACR+ S  G  +VG     R LYALH+ SYLLLF AF V+VTLW+DVAVFEPNE T LMN RSM+ LC+CY+LVT +AVSVCLG+G VKYF SS  FLLFCAYSIA LLLLG+ FLVLGCLLQ+RICRVLV GSCTA  TAR+VRLNVVMLACF CFTMRA MLA L++ QAEGE   N+  GW++ E DMR+EWA HVIPCVAMLYLMR +GEP+S  S  A          DE T     +   GYG
Sbjct:   64 VASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGI-AVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMN-RSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSGADVEDGYG 338          
BLAST of mRNA_S-dermatodea_contig105.355.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.670e-56
Identity = 145/347 (41.79%), Postives = 184/347 (53.03%), Query Frame = 0
Query:    8 LAGLLTMCVVSAIALVRLVAVLRTFRRQ---RRGLHS--SSNCY----LLPRHDSGNSSVANGAGSSVASSRILLPS-LVFHVLVFLCLATEVPVYACRYASGGG---FCSVGRPLYALHLASYLLLFNAFCVIVTLWSDVAVFEPNEWTVLMNSRSMLVLCLCYLLVTAVAVSVCL-GLGGVKYFFSSTVFLLFCAYSIAALLLLGSCFLVLGCLLQRRICRVL------------------------------------------VAGSCTATTTARVVRLNVVMLACFVCFTMRAFMLAALVEVQAEGEIDRNFGMGWEKWEWDMRMEWAPHVIPCVAMLYLMR 298
            LAGL+T  + +AIA  RL+ VLR   R    RR L    S + Y      P H +           ++     LLP   +FHVLVFLCLA EVPVYA  Y +  G      VGR LYALHL SYLLL  AFC+IV LWS VA FEP+ W +L N R +LVLC+ Y LVTAVAV  CL      + +F+S  F+ FCA+SI ALLLL +CFLVLGCL+Q+RIC  L                                                   T  V+RLN V+L CFVCF+ RA +L  L+ ++  G        GW +W+ ++ +EW P+V+PC+A+LYLMR
Sbjct:    9 LAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYA-------TQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLAN-RLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG---GWTRWQQEVYVEWIPNVVPCLALLYLMR 344          
BLAST of mRNA_S-dermatodea_contig105.355.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 113 bits (282), Expect = 4.510e-25
Identity = 80/250 (32.00%), Postives = 123/250 (49.20%), Query Frame = 0
Query:   71 ILLPSLVFHVLVFLCLATEVPVYACRYASGGGFCSVGRP---------LYALHLASYLLLFNAFCVIVTLWSDVAVFEPNEWTVLMNSRSMLVLCLCYLLVTAVAVSVCLGLGGVKYFFSSTVFLLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVAGSCTATTT-ARVVRLNVVMLACFVCFTMRAFMLAALVEVQAE-------GEIDRNFGMGWEKWEWDMRMEWAPHVIPCVAMLYLMRNSGEP 303
            ++   L+FH L+ L L  ++P+Y C YA  G   S G           LY +++ SY LLF AFC+++ LW+ + +F      +L+  RS++ +C+ Y L +  A   C+    +  +  S  ++LF    I  L  L   FL++GC+LQ RICR L           A V RLN V+  C + F MRA +L A +   A                +  E W   +  EW PH+ PC+A++YL+RN+  P
Sbjct:   64 VVQQKLLFHQLILLSLMLQIPLYVC-YAIAG---SQGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWL--VLAEWVPHLAPCIALMYLLRNASGP 307          
BLAST of mRNA_S-dermatodea_contig105.355.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.150e-6
Identity = 28/58 (48.28%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  279 MRMEWAPHVIPCVAMLYLMRNSGEPASGGSEEARH------NDEKTELGSVETSGGYG 330
            M +EWA HVIPCVAMLYLMR +GEP+S  S  A         +E+T     +   GYG
Sbjct:    1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTAGKDYGGNERTGFTGADVEDGYG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig105.355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN17_ECTSI3.040e-11367.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA1.670e-5641.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK4.510e-2532.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KRT8_9PHAE3.150e-648.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 257..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..179
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig105contigS-dermatodea_contig105:26271..30722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig105.355.1mRNA_S-dermatodea_contig105.355.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig105 25163..30722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig105.355.1 ID=prot_S-dermatodea_contig105.355.1|Name=mRNA_S-dermatodea_contig105.355.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=338bp
MREQSLILAGLLTMCVVSAIALVRLVAVLRTFRRQRRGLHSSSNCYLLPR
HDSGNSSVANGAGSSVASSRILLPSLVFHVLVFLCLATEVPVYACRYASG
GGFCSVGRPLYALHLASYLLLFNAFCVIVTLWSDVAVFEPNEWTVLMNSR
SMLVLCLCYLLVTAVAVSVCLGLGGVKYFFSSTVFLLFCAYSIAALLLLG
SCFLVLGCLLQRRICRVLVAGSCTATTTARVVRLNVVMLACFVCFTMRAF
MLAALVEVQAEGEIDRNFGMGWEKWEWDMRMEWAPHVIPCVAMLYLMRNS
GEPASGGSEEARHNDEKTELGSVETSGGYGSYGSGPG*
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