prot_S-dermatodea_contig105.352.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig105.352.1
Unique Nameprot_S-dermatodea_contig105.352.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length185
Homology
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: B7ZGM8_9PHAE (Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM8_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 3.110e-68
Identity = 124/188 (65.96%), Postives = 139/188 (73.94%), Query Frame = 0
Query:    1 MAQRSRRNSLMASVPTLFAAAMLQQEGCQAF----------ASTMSGASTIQRLDKGGTSNAIKAISSPLVNVKHIEPVGNVADFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHLRAA 178
            M  RSRR S MA+    FA A +   G QAF          AS+    +T  R D GGT   I AI+SP V  K I+ VGNV +F+R VA RPK+VVAVWFQASWCRKCKYIGSRLR L+EHLP+ LT+NL+L SIDVNKVAEVPQRQKI+DLPTIQFFVEGKEVGSYVATD+GE FY NMERHLRAA
Sbjct:    1 MVPRSRR-STMAAALLAFAVAAVHNCG-QAFVLTRVPLAMGASSAGAVATGARRDVGGTRTPISAIASP-VTTKEIQTVGNVEEFDRIVA-RPKQVVAVWFQASWCRKCKYIGSRLRRLDEHLPAYLTNNLVLVSIDVNKVAEVPQRQKIKDLPTIQFFVEGKEVGSYVATDKGEAFYSNMERHLRAA 184          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A6H5KPM9_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPM9_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 5.090e-60
Identity = 95/149 (63.76%), Postives = 119/149 (79.87%), Query Frame = 0
Query:   35 MSGASTIQRLDKGGTSNAIKAISSPLVNVKHIEPVGNVADFERAVA-TRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHLRAALGEE 182
            M+ A+ +Q L+ GGT   I+AI+ P  NVK I  V N  +FE  +   RPK+VVA+WF ASWCRKCKYIG+RL+ L+EHLP+ L++NL++ SIDVN+VA+VPQRQKI+DLPTIQFFV+G  VGSYVA DRGE FY NME+HLRAALGE+
Sbjct:   32 MAKAAAVQ-LEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLLRLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLSNNLVVVSIDVNQVAQVPQRQKIKDLPTIQFFVDGGMVGSYVANDRGEAFYANMEKHLRAALGED 179          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A6T6LFR0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6LFR0_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 5.490e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:   74 DFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGK 153
            DF RA+  + K +VA+ F A+WCRKC ++  ++  L    P     N+L A +D+N VAE+P+RQ+I ++PTIQ F +GK
Sbjct:   71 DFHRAI--QYKSIVAIAFHAAWCRKCIWLIPKIEKLAVEYP-----NILFAKVDINTVAEIPRRQEIHNIPTIQIFQDGK 143          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A1Y1WCJ5_9FUNG (Thioredoxin n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WCJ5_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 1.370e-6
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   69 VGNVADFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEG 152
            + ++  FE  +A  PK  VAV F A+WC  C+ I      L E +     + ++ A++DV+ V+EV Q+  IR +PT  FF +G
Sbjct:    6 ITSLQQFEELIANNPK--VAVDFTATWCGPCRLISPVFHKLAETI-----EGVVFATVDVDDVSEVAQKNGIRAMPTFIFFKDG 82          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A399CXU9_9BACT (Thioredoxin n=2 Tax=Mariniphaga sediminis TaxID=1628158 RepID=A0A399CXU9_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 2.170e-6
Identity = 34/122 (27.87%), Postives = 63/122 (51.64%), Query Frame = 0
Query:   59 PLVNVKHIEPVGNVADFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHLRAALG 180
            P+ +   I+ +GN  +F+  +    + +  V F A WC  CK +   L  + E       D + +A ++V++  ++ QR K+R++PT+  F +GKEV  YV    G    + +E+ + + LG
Sbjct:    3 PVADSNKIKVLGN-KNFKPVIR---RGITLVDFWAPWCAPCKMVAPVLNEIAE-----AEDRVTIAKVNVDQQQQLAQRFKVRNIPTLIMFRDGKEVNRYV----GVKTKKFLEKEIASELG 111          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A7X9GEF1_9FIRM (Thioredoxin n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A7X9GEF1_9FIRM)

HSP 1 Score: 53.9 bits (128), Expect = 2.900e-6
Identity = 31/102 (30.39%), Postives = 51/102 (50.00%), Query Frame = 0
Query:   74 DFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHL 175
            DFE+ V T    V+ V F A WC  C  I   +    E +  +    + +A +D+ K  +V +  K+R +PT+ FF +GKE+   +     +   R +E+HL
Sbjct:   13 DFEQFVGTSNMPVL-VEFWADWCSPCHMIAPVV----EEIAGEFAGKIQVARLDLEKNQKVGENLKVRSIPTLIFFKDGKEIERSIGFKSRDDLRRLIEKHL 109          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: UPI000829F01B (thioredoxin domain-containing protein n=1 Tax=Nocardia xishanensis TaxID=238964 RepID=UPI000829F01B)

HSP 1 Score: 53.9 bits (128), Expect = 2.970e-6
Identity = 32/101 (31.68%), Postives = 51/101 (50.50%), Query Frame = 0
Query:   75 FERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHL 175
            F   V    K V+ V F A WC  C+    RLR + +    +L+D L++ S++V +  E+ +R ++R  PT+  FV+G+ V   V  D    F    E +L
Sbjct:   12 FAETVLGAGKPVLVV-FSAPWCGPCRRATPRLRQIAD----ELSDRLVVVSVNVEEHPELAERYRVRAFPTLGLFVDGRLVHHSVGVDPVPEFLDEFEDYL 107          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A521GEX4_9BACT (Thioredoxin n=2 Tax=Cytophagales TaxID=768507 RepID=A0A521GEX4_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 5.640e-6
Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   87 VAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHLRAAL 179
            V V F A WC  CK IG  +    E L S+     ++A +DV++ A++PQ+  IR +PT+  F  G+ +   +    G V    +E+ L+AAL
Sbjct:   25 VLVDFWAEWCGPCKMIGPVV----EQLASEFDGKAVVAKMDVDQNAKIPQQFGIRSIPTLMVFKNGQMIDKVI----GAVPKNVLEQKLQAAL 109          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: A0A6C0GLV4_9BACT (Thioredoxin n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GLV4_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 1.140e-5
Identity = 32/103 (31.07%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   73 ADFERAVATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGSYVATDRGEVFYRNMERHL 175
            A+F+  V  + KE+V V F A WC  C  I      + E L ++      +A +DV++  E+  R K+R+LPT+ FF +GK V   V     +     + ++L
Sbjct:   14 ANFDLEVL-QSKELVMVDFGADWCPPCNAISP----IVEILATEFAGKAKIAKLDVDENPEITSRFKVRNLPTLLFFKDGKVVDKIVGAVGKKAMTEKLNQYL 111          
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Match: UPI00141F9689 (thioredoxin n=1 Tax=Brooklawnia cerclae TaxID=349934 RepID=UPI00141F9689)

HSP 1 Score: 52.0 bits (123), Expect = 1.430e-5
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 0
Query:   75 FERAV--ATRPKEVVAVWFQASWCRKCKYIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFVEGKEVGS 157
            FE+ V  AT+P   V V + A WC  CK +   +  L+E       D ++ A +D N   +VP +Q +  LPT+QFFV G+ V +
Sbjct:   11 FEQEVLKATKP---VLVDYWADWCSPCKQLSPIVDELSE----TYGDRMVFAKLDTNTNPDVPMKQGVMALPTLQFFVNGEVVSA 88          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig105.352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
B7ZGM8_9PHAE3.110e-6865.96Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxI... [more]
A0A6H5KPM9_9PHAE5.090e-6063.76Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A6T6LFR0_9RHOD5.490e-1343.75Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1Y1WCJ5_9FUNG1.370e-635.71Thioredoxin n=1 Tax=Linderina pennispora TaxID=613... [more]
A0A399CXU9_9BACT2.170e-627.87Thioredoxin n=2 Tax=Mariniphaga sediminis TaxID=16... [more]
A0A7X9GEF1_9FIRM2.900e-630.39Thioredoxin n=1 Tax=Peptococcaceae bacterium TaxID... [more]
UPI000829F01B2.970e-631.68thioredoxin domain-containing protein n=1 Tax=Noca... [more]
A0A521GEX4_9BACT5.640e-634.41Thioredoxin n=2 Tax=Cytophagales TaxID=768507 RepI... [more]
A0A6C0GLV4_9BACT1.140e-531.07Thioredoxin n=1 Tax=Rhodocytophaga rosea TaxID=270... [more]
UPI00141F96891.430e-536.47thioredoxin n=1 Tax=Brooklawnia cerclae TaxID=3499... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 56..179
e-value: 7.8E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 68..162
NoneNo IPR availablePANTHERPTHR10438:SF391THIOREDOXINcoord: 68..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 72..169
e-value: 3.5E-15
score: 55.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 44..180
score: 9.193
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 60..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig105contigS-dermatodea_contig105:13739..16999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig105.352.1mRNA_S-dermatodea_contig105.352.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig105 12211..17082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig105.352.1 ID=prot_S-dermatodea_contig105.352.1|Name=mRNA_S-dermatodea_contig105.352.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=185bp
MAQRSRRNSLMASVPTLFAAAMLQQEGCQAFASTMSGASTIQRLDKGGTS
NAIKAISSPLVNVKHIEPVGNVADFERAVATRPKEVVAVWFQASWCRKCK
YIGSRLRHLNEHLPSDLTDNLLLASIDVNKVAEVPQRQKIRDLPTIQFFV
EGKEVGSYVATDRGEVFYRNMERHLRAALGEEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf