prot_S-dermatodea_contig10425.310.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10425.310.1
Unique Nameprot_S-dermatodea_contig10425.310.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length128
Homology
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.390e-70
Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0
Query:    2 ESIKFGTCSLQSDKYICVCQGGELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKLEGCQV 128
            ESIKFGTCSLQSDKYICVCQGGELVIVDMTAGNAVKRWPISAEAAIMNPT KIVALR   QLQIFNLEAKSRLKSHTISEPIVFW+W   T+IALVTASAVFHWSM GDSGPQK+FNRDAKLEGCQV
Sbjct:   12 ESIKFGTCSLQSDKYICVCQGGELVIVDMTAGNAVKRWPISAEAAIMNPTQKIVALRAQGQLQIFNLEAKSRLKSHTISEPIVFWKWFDATTIALVTASAVFHWSMGGDSGPQKIFNRDAKLEGCQV 138          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.910e-56
Identity = 93/127 (73.23%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    2 ESIKFGTCSLQSDKYICVCQGGELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKLEGCQV 128
            E+IKFGTCSL+SDKYICVCQ GELVIVDM AGN V R PISAEAAIMNP SKIVALR A QLQIFNL+ K+R+K+HTIS+PI +WRW+ P++IALV+A+AV+HWSMEG   P K+F+RD KLEG Q+
Sbjct:   24 EAIKFGTCSLESDKYICVCQNGELVIVDMAAGNTVTRRPISAEAAIMNPVSKIVALRAAGQLQIFNLDTKARVKAHTISDPIQYWRWLDPSTIALVSATAVYHWSMEGADPPAKVFDRDGKLEGSQI 150          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A2P4YLB1_9STRA (Clathrin heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLB1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.160e-44
Identity = 77/133 (57.89%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 VESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKLE-GCQV 128
            ++ +KFGT +++SDK++CVC+       +VIVDM AGN V+R PI+AEAAIMNP SK++ALR   QLQIFN+E ++++KSH ++E +VFWRWI+  +IALVTASAVFHWS+EGDS P K+F+R A L  G Q+
Sbjct:   22 LDYVKFGTTTMESDKFVCVCEQVNGQASVVIVDMAAGNTVQRRPINAEAAIMNPVSKVIALRAENQLQIFNMELRAKMKSHLMNEAVVFWRWISVNTIALVTASAVFHWSIEGDSPPTKIFDRHANLSSGTQI 154          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A7S2V2C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.630e-44
Identity = 79/132 (59.85%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    2 ESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKLE-GCQV 128
            ++IKFG CSL+SDK+ICVC+       +VIVD+   NAV R PISAEAAIMNP SKI+ALR    LQIFNLEA+S++KSH +++ +VFWRW+   ++A+VTA+AVFHWS+EGDSGP K+F+R A L  G Q+
Sbjct:   15 DAIKFGHCSLESDKFICVCETVNGQASVVIVDLQNNNAVTRKPISAEAAIMNPVSKIIALRAQGTLQIFNLEARSKMKSHALTDAVVFWRWVDTKTVAVVTATAVFHWSIEGDSGPVKVFDRHASLSTGNQI 146          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A067C3W3_SAPPC (Clathrin-link domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3W3_SAPPC)

HSP 1 Score: 163 bits (412), Expect = 4.650e-44
Identity = 74/127 (58.27%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    1 VESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKL 123
            ++ +KFGTC+++SDK+I VC+       +VIVDM AGN V+R PI+AEAAIMNP +K++ALR   QLQIFN+E ++++KSH +++PIVFWRWITP +I +VTA+AV+HWS+EGDS P K F+R A L
Sbjct:   21 LDYVKFGTCAMESDKFITVCETVNGQANVVIVDMAAGNNVQRRPIAAEAAIMNPLTKVIALRAGSQLQIFNMELRAKMKSHQMTDPIVFWRWITPNTIGMVTATAVYHWSIEGDSAPAKQFDRHANL 147          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A2D4BEN2_PYTIN (Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BEN2_PYTIN)

HSP 1 Score: 163 bits (412), Expect = 4.750e-44
Identity = 76/133 (57.14%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 VESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKL-EGCQV 128
            +E +KFGT +++SDK++CVC+       +VIVD+ AGN V+R PI+AEAAIMNP SK++ALR   QLQIFN+E ++++KSH ++EP+VFWRWI+  +IALVT SAV+HWS++GDS P KMF+R A L  G Q+
Sbjct:  453 LEYVKFGTTTMESDKFVCVCEQVNGQASVVIVDLAAGNQVQRRPINAEAAIMNPVSKVIALRSENQLQIFNMELRAKMKSHLMTEPVVFWRWISVNTIALVTGSAVYHWSLDGDSAPVKMFDRHASLGAGTQI 585          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A024U3J7_9STRA (Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U3J7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.430e-44
Identity = 76/127 (59.84%), Postives = 101/127 (79.53%), Query Frame = 0
Query:    1 VESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKL 123
            +E +KFGTC+++SDK+I VC+       +VIVDM AGN V+R PI+AEAAIMNP +K++ALR   QLQIFN+E ++++K+H ++E IVFWRWITP +I LVTA AV+HWS+EGDS PQK F+R A L
Sbjct:   21 LEYVKFGTCAMESDKFITVCETVNGQANVVIVDMAAGNNVQRRPIAAEAAIMNPLTKVIALRAGPQLQIFNMELRAKMKTHQMTEAIVFWRWITPNTIGLVTAGAVYHWSIEGDSPPQKQFDRHANL 147          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A5D6XWJ0_9STRA (Clathrin-link domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWJ0_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.270e-43
Identity = 75/130 (57.69%), Postives = 103/130 (79.23%), Query Frame = 0
Query:    4 IKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKL-EGCQV 128
            +KFGT +++SDK++CVC+       +VIVD+ AGN V+R PI+AEAAIMNP SK++ALR   QLQIFN+E ++++KSH ++EP+VFWRW++   IALVTASAV+HWS+EGDS P K+F+R A L  G Q+
Sbjct:   25 VKFGTTTMESDKFVCVCEQVNGQASVVIVDLAAGNTVQRRPINAEAAIMNPVSKVIALRSENQLQIFNMELRAKMKSHLMNEPVVFWRWVSVNLIALVTASAVYHWSIEGDSAPVKVFDRHANLGAGTQI 154          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 160 bits (405), Expect = 4.140e-43
Identity = 74/130 (56.92%), Postives = 104/130 (80.00%), Query Frame = 0
Query:    4 IKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKL-EGCQV 128
            +KFGT +++SDK++CVC+       +VIVD++AGN+V+R PI+AEAAIMNP SK++ALR   QLQIFN+E ++++KSH ++EP+VFWRW++   IALVT SAV+HWS+EGDS P K+F+R A L  G Q+
Sbjct:   25 VKFGTTTMESDKFVCVCEQVNGQASVVIVDLSAGNSVQRRPINAEAAIMNPVSKVIALRSENQLQIFNMELRAKMKSHLMNEPVVFWRWVSVNLIALVTGSAVYHWSIEGDSAPVKVFDRHANLGPGTQI 154          
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Match: A0A7S4DKD8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKD8_HETAK)

HSP 1 Score: 154 bits (388), Expect = 6.860e-43
Identity = 72/132 (54.55%), Postives = 102/132 (77.27%), Query Frame = 0
Query:    2 ESIKFGTCSLQSDKYICVCQG----GELVIVDMTAGNAVKRWPISAEAAIMNPTSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTASAVFHWSMEGDSGPQKMFNRDAKLE-GCQV 128
            E+IKFG+C+++SD++I VC+       +V++D+  GN V R PISAEAAIMNPTSKI+ALR   Q+Q+FNLE++S++K+H ++E  VFWRWI+PT I LVT +AV+HW +EGD+ P K+F+R A L  G Q+
Sbjct:   24 EAIKFGSCTMESDRFITVCETVNGQSNVVMIDLQNGNQVTRRPISAEAAIMNPTSKIIALRAGTQVQMFNLESRSKIKAHAMTETCVFWRWISPTVIGLVTPTAVYHWPLEGDATPAKVFDRHASLAAGSQI 155          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10425.310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD1_ECTSI1.390e-7091.34Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YZH1_9STRA1.910e-5673.23Clathrin heavy chain n=1 Tax=Tribonema minus TaxID... [more]
A0A2P4YLB1_9STRA4.160e-4457.89Clathrin heavy chain (Fragment) n=1 Tax=Phytophtho... [more]
A0A7S2V2C2_9STRA4.630e-4459.85Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A067C3W3_SAPPC4.650e-4458.27Clathrin-link domain-containing protein n=1 Tax=Sa... [more]
A0A2D4BEN2_PYTIN4.750e-4457.14Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 Re... [more]
A0A024U3J7_9STRA6.430e-4459.84Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxI... [more]
A0A5D6XWJ0_9STRA2.270e-4357.69Clathrin-link domain-containing protein n=1 Tax=Py... [more]
K3WLC2_GLOUD4.140e-4356.92Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ... [more]
A0A7S4DKD8_HETAK6.860e-4354.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016025Clathrin heavy chain, N-terminalGENE3D2.130.10.110coord: 1..128
e-value: 7.8E-53
score: 181.3
IPR016025Clathrin heavy chain, N-terminalSUPERFAMILY50989Clathrin heavy-chain terminal domaincoord: 2..128
NoneNo IPR availablePANTHERPTHR10292CLATHRIN HEAVY CHAIN RELATEDcoord: 3..128
NoneNo IPR availablePANTHERPTHR10292:SF1CLATHRIN HEAVY CHAINcoord: 3..128
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10425contigS-dermatodea_contig10425:6072..7249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10425.310.1mRNA_S-dermatodea_contig10425.310.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10425 6072..7249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10425.310.1 ID=prot_S-dermatodea_contig10425.310.1|Name=mRNA_S-dermatodea_contig10425.310.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=128bp
VESIKFGTCSLQSDKYICVCQGGELVIVDMTAGNAVKRWPISAEAAIMNP
TSKIVALRGAWQLQIFNLEAKSRLKSHTISEPIVFWRWITPTSIALVTAS
AVFHWSMEGDSGPQKMFNRDAKLEGCQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016025Clathrin_H-chain_N