prot_S-dermatodea_contig10365.270.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10365.270.1
Unique Nameprot_S-dermatodea_contig10365.270.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length296
Homology
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 4.690e-62
Identity = 138/231 (59.74%), Postives = 161/231 (69.70%), Query Frame = 0
Query:   73 LCVAILVLVSAAR--TSQAFVCPAAARAGQRA------SPLAARSLVVEKAPRVAPWRRTGTSFAAPAARAPG--RSTTMLAFPSAAISSVVSPQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPEMLTRGVAY 293
            L    ++LV++ R  + Q FV P A R G R        P  AR +VV+K  R     R          R PG   S TM A   AA+SS+++P V  AS RAV+ELL CCVLGVVAAK+GIL PV+V ALSKIVYGIFLP+LLMVNVAKTCVSQ VASLLPIP FA IQ+ +GL ++  AMRLLRI+P TE GRE KVC  FQNSGILPLIFLNAMFRG+PE+L+RGVAY
Sbjct:   54 LAAVFVLLVASLRAPSCQGFVAPLATRTGIRGWTGIRGGPSLAR-VVVDKEARTTKLGRL---------RVPGGGHSLTMSAGLPAAVSSMINPVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQVALGLAISEVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAY 274          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.950e-43
Identity = 83/141 (58.87%), Postives = 111/141 (78.72%), Query Frame = 0
Query:  156 PQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPE--MLTRGVAYV 294
            P V  +SVRAVAELL+CCV GV AAK+G+L P +V ALS+IVY IFLP+LL+VNVA+T +SQP+++LLPIP+FA  QI +G  +    M++LRI+P TE GRE +VC  F NSGILPL+F+NA+FR +P+  +L R +AY+
Sbjct:    8 PTVVASSVRAVAELLTCCVFGVTAAKKGVLTPTNVSALSQIVYNIFLPSLLLVNVAETAISQPLSTLLPIPLFAWAQIFIGYKIARLTMKVLRIEPTTEEGREVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYI 148          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A7S3YSG6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSG6_9EUKA)

HSP 1 Score: 107 bits (266), Expect = 2.270e-22
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0
Query:  154 VSPQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPEMLTRGVAYV 294
            + P VA  ++ A++EL +  ++G +  + G+L+   V  LS++V+ + LPALL  +VAKT    P++ LLPIP FA +QIGVGL+++   +R+LR+D  +   R T+V   F NSG+LPL F++A+FR  P +  +  A+V
Sbjct:  238 IDPCVAKTALSAMSELFAQILVGFICFRSGLLSTSHVKVLSRVVFNLLLPALLFTSVAKTVACTPLSDLLPIPTFAILQIGVGLILSQVVLRILRLDTTSHNARATQVLSAFGNSGVLPLAFVSALFRSQPLIQAKAEAFV 378          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A7S3XRL6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL6_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 7.400e-19
Identity = 52/122 (42.62%), Postives = 81/122 (66.39%), Query Frame = 0
Query:  175 LGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPE--MLTRGVAYV 294
            LG  A+  G+L+  +  ALSK  Y +FLPALL+VNVA T  SQ + +LLP+P+ A +QI + +   +   +LL I+  +  GR   VC +F N+G+LP++F+NA+FRG+P+  +L R ++ V
Sbjct:    4 LGYQASVNGVLDQPTRSALSKCTYSLFLPALLLVNVANTVASQSILTLLPLPLMAMLQIILVMGCANLLAKLLGIERASYEGRVFNVCSSFGNAGLLPMLFVNALFRGHPDPTVLPRAISSV 125          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A6H5JBW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW8_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.500e-14
Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 0
Query:  168 ELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVS--QPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPEMLTRG 290
            +L++ C +G   +K+GIL+  ++ +LSK+++ +F P LL VNVA T  +  Q ++ LL +PVFA +QI  G  V  A  ++L +   +   RE + C +F NSG LPL+F++++F  +P M   G
Sbjct:    2 KLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQILFGSAVGKAMEKILGLKEGSPEARELRTCTSFANSGPLPLLFVDSIFGAHPGMRIEG 126          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.830e-14
Identity = 57/138 (41.30%), Postives = 88/138 (63.77%), Query Frame = 0
Query:  161 ASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVS--QPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRG--NPEMLTRGVAYV 294
            AS  AV++L++   LG  AA R +L+  +   LS++++ IF PALL VNVA T  +  Q +++L  IP+FA  QI VG LV S  + +LR+  ++  GRE ++   F NSG LPL+F +++F G  +P M +R VA++
Sbjct:   87 ASASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRVPRESIPGRELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFI 224          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A8J6CA09_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA09_DIALT)

HSP 1 Score: 77.0 bits (188), Expect = 3.330e-12
Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 0
Query:  155 SPQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQPVA-SLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNP----EMLTRGVAYV 294
            SP V   S  AVAEL     LG  A + G+L    V  L++IVY  FLP  L  +V +T  +  V+  +L +P+ +AIQI  GL V    +R L I P     R    C  F N+G+LPL+   A+FR  P     +L R  +Y+
Sbjct:   64 SPAVFATSAGAVAELAVSAGLGYAAVRSGLLERSGVTQLARIVYNFFLPIFLFASVTRTVQTYGVSRGMLALPLVSAIQIACGLSVARLLLRALGISPALRSSRRFVTCAAFGNTGVLPLVLAEAIFRSPPYADATVLPRAASYL 208          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.100e-12
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 0
Query:  148 AAISSVVSPQVAVASVRAVAELLSCCVLGVVAAKRGI-LNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQ----PVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPE--MLTRGVAYV 294
            A + ++++P V  AS++AV+ L++C VLG + A  G  L+  +   LS+++Y +  PALL+ +VA T          A L  +P FAA+QI  G ++    + L          +E ++C TF NSG LPL+ ++A FR +P+  +L   V YV
Sbjct:   12 AGMGNLMNPAVLQASIKAVSSLVACVVLGTLVAGPGKPLDAEACATLSRLIYNVLQPALLLTSVATTITRAGGIGAAAQLFVLPAFAALQIAAGAILGLGLVSLFGWRKSGTNAKELQICSTFGNSGPLPLLLVDAFFRNHPDPTLLPAAVGYV 165          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A482USC9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482USC9_9ARCH)

HSP 1 Score: 73.6 bits (179), Expect = 5.050e-11
Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 0
Query:  155 SPQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVS--------QPVASLLPIPVFAAIQIGVGLLVTSAAMRLL--RIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRG--NPEMLTRGVAYV 294
            S  V  A+ +A+++LL+ C +GV+A+   IL+  ++  LSK+++ +F P LL VNVA T  +         P A  L +P+ A +Q  +G +       L+  R   ++E  ++ + C TF NSG LPL+F + +FR   NP +L + VAY+
Sbjct:  114 SAAVGKAAYKAISKLLATCGIGVLASNYKILDQTALSVLSKLIFSVFQPCLLFVNVASTVANLGKNTSAGSPAAIYL-LPLAALLQTLLGYVTGKLVAFLMYGRAGSESESAKQLQACTTFGNSGPLPLVFTDGLFRAHSNPLLLQQSVAYI 264          
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Match: A0A0G4FFE0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFE0_9ALVE)

HSP 1 Score: 72.8 bits (177), Expect = 9.210e-11
Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 0
Query:  156 PQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGIFLPALLMVNVAKTCVSQ------PVASLLPIPVFAAIQIGVGLLVTSAAMRLLRIDPQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPEMLTRGVAYV 294
            P    AS RA+AELL+   +GV+  K+  L+  +   LS+++  +FLP+ L+ NVA T  +        +   + +P+F   QI +G +V     RLL +D  +E GR  +    F NSG +PL+F+NAM+R  PE L    +Y+
Sbjct:   78 PAAVSASGRALAELLALIGIGVL--KKSDLDIPTRKGLSRLLKNVFLPSFLLTNVANTLATNLASGDGGMTKFVVLPLFCVTQIIIGGIVGEVLCRLLGLDRWSEDGRRVRALSAFTNSGPVPLLFVNAMYRSQPETLRILSSYI 220          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10365.270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KMD6_9PHAE4.690e-6259.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLT3_9STRA6.950e-4358.87Auxin efflux carrier n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3YSG6_9EUKA2.270e-2240.43Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S3XRL6_HETAK7.400e-1942.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5JBW8_9PHAE1.500e-1437.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SS74_9STRA2.830e-1441.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J6CA09_DIALT3.330e-1237.24Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S1TU85_9STRA4.100e-1234.42Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A482USC9_9ARCH5.050e-1134.21Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0G4FFE0_9ALVE9.210e-1135.17Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 163..293
e-value: 1.3E-13
score: 50.1
IPR039305Protein PIN-LIKES 2/6PANTHERPTHR31419FAMILY NOT NAMEDcoord: 156..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..295
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 188..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10365contigS-dermatodea_contig10365:1335..8001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10365.270.1mRNA_S-dermatodea_contig10365.270.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10365 1335..8001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10365.270.1 ID=prot_S-dermatodea_contig10365.270.1|Name=mRNA_S-dermatodea_contig10365.270.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=296bp
VTNCYHLCTRAVVAQRGNNLLQQHNACQGVSIIEGMLPSRQRRLRGNLAP
AMPTHDPCARQRRAPRPNRGGLLCVAILVLVSAARTSQAFVCPAAARAGQ
RASPLAARSLVVEKAPRVAPWRRTGTSFAAPAARAPGRSTTMLAFPSAAI
SSVVSPQVAVASVRAVAELLSCCVLGVVAAKRGILNPVSVGALSKIVYGI
FLPALLMVNVAKTCVSQPVASLLPIPVFAAIQIGVGLLVTSAAMRLLRID
PQTEVGRETKVCGTFQNSGILPLIFLNAMFRGNPEMLTRGVAYVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004776Mem_trans
IPR039305PILS2/6