prot_S-dermatodea_contig10352.258.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10352.258.1
Unique Nameprot_S-dermatodea_contig10352.258.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length164
Homology
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A6H5JUA1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUA1_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 6.870e-55
Identity = 95/161 (59.01%), Postives = 123/161 (76.40%), Query Frame = 0
Query:    1 MWLCAEHRLGRVGALKWSAIGAAVSALIMAMVTNVTVLFAIMSIVTLFFNAVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDDDSWDRREGVSMKDSYIEPTEGSYSDSAM 161
            M LC+E  LGRVGALKWS+   A + L++A    V  LFA+ S++TLF   +PG V+Y++TPELY+TKYRAVGLG+AS VTRLGGL+AP+LAE+LYD+GG VAPL+VFGPIM++T  AA MIP+ETAG +LDDDSWDR+E      ++  P    YSD+ +
Sbjct:  337 MRLCSERCLGRVGALKWSSFATATAVLLLATTVQVEALFAVASLLTLFVVTIPGIVIYVLTPELYATKYRAVGLGAASCVTRLGGLIAPMLAELLYDRGGPVAPLLVFGPIMIITGIAAGMIPVETAGRELDDDSWDRKEPAKTTRAFARPHAEPYSDAPV 497          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A6H5JL66_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL66_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.510e-54
Identity = 96/150 (64.00%), Postives = 115/150 (76.67%), Query Frame = 0
Query:    1 MWLCAEHRLGRVGALKWSAIGAAVSALIMAMVTNVTVLFAIMSIVTLFFNAVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDDDSWDRREGVSMKDSYIE 150
            MWLC+EHRLGRVGALKWS+   A + +++A    V  LF + SI+ LF  AVP TV Y++TPELYSTKYRAVGLGS+SV TRLGGL+AP+LAEVLYD  G VAPL+VFGPIM++T  AA MIP+ETAG +LDDDSWDR    +     IE
Sbjct:  402 MWLCSEHRLGRVGALKWSSYATAAAVILLATTLRVNALFGLASILVLFITAVPATVKYVMTPELYSTKYRAVGLGSSSVATRLGGLLAPVLAEVLYDGWGPVAPLLVFGPIMIITGIAAGMIPVETAGRQLDDDSWDRAAKTTFSCQNIE 551          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A6H5JDE1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDE1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.250e-54
Identity = 93/140 (66.43%), Postives = 112/140 (80.00%), Query Frame = 0
Query:    1 MWLCAEHRLGRVGALKWSAIGAAVSALIMAMVTNVTVLFAIMSIVTLFFNAVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDDDSWDRRE 140
            MWLC+E RLGRVGALKWS+   A + +++A    V  LFA  SI+TLF   +PGTV Y++TPE+YSTKYR VGLGS SVVTRLGGL+AP+LAEVLYD  G VAPL+VFGPIM++T  AA MIP+ETAG +LDDDSWD +E
Sbjct:  316 MWLCSERRLGRVGALKWSSYATAAAVILLATTLRVKALFAPASILTLFITTIPGTVKYVLTPEIYSTKYRTVGLGSTSVVTRLGGLLAPVLAEVLYDSWGPVAPLLVFGPIMIITGIAAGMIPVETAGRQLDDDSWDLKE 455          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: D7FV27_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV27_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 8.580e-44
Identity = 80/124 (64.52%), Postives = 98/124 (79.03%), Query Frame = 0
Query:    1 MWLCAEHRLGRVGALKWSAIGAAVSALIMAMVTNVTVLFAIMSIVTLFFNAVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPI 124
            MWLC+EHRLGRVGALKWS+   A + +++A    V  LF + SI+TLF   +P TV Y++TPELYSTKYRAVGLGS+SVVTRLGGL+AP+LAEVLYD  G VAPL+VFGPIM++T  AA M  +
Sbjct:  308 MWLCSEHRLGRVGALKWSSYATAAAVILLATTLRVNALFGLASILTLFVTTIPVTVKYVLTPELYSTKYRAVGLGSSSVVTRLGGLLAPVLAEVLYDHWGPVAPLLVFGPIMIITGIAAGMFRV 431          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A226EUC0_FOLCA (Synaptic vesicle 2-related protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EUC0_FOLCA)

HSP 1 Score: 65.9 bits (159), Expect = 1.580e-9
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   32 VTNVTVLFAIMSIVTLFFNAVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDD 133
            V    +LFA   IV+  F A      Y+ TPE+Y T  R++G+G+ S + R+G +V P +A+V+Y +  ++A   V+G I L+ A  A M+PIET G ++ D
Sbjct:  477 VVKTIILFAARGIVSGVFQAA-----YVYTPEVYPTSMRSIGIGTCSSMARIGAMVTPYVAQVIYKQSVALAA-GVYGVIALMAAVVAIMLPIETKGKEMPD 572          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: UPI0007EF8345 (organic cation/carnitine transporter 7-like isoform X1 n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF8345)

HSP 1 Score: 63.2 bits (152), Expect = 1.330e-8
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   55 TVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDD 133
            T+ Y+  PE+Y T  RA G+G AS V R+GG+++P++A  L       A +++F  ++L++  +  ++P+ET G KL D
Sbjct:  429 TISYIYAPEIYPTSVRATGVGIASSVGRVGGMISPLVAVKLVTDCHQAAAVLLFAGVILLSGLSVLLLPLETKGRKLSD 507          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A161ZY97_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161ZY97_DAUCS)

HSP 1 Score: 63.2 bits (152), Expect = 1.500e-8
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   55 TVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDD 133
            T+ Y+  PE+Y T  RA G+G AS V R+GG+++P++A  L       A +++F  ++L++  +  ++P+ET G KL D
Sbjct: 1061 TISYIYAPEIYPTSVRATGVGIASSVGRVGGMISPLVAVKLVTDCHQAAAVLLFAGVILLSGLSVLLLPLETKGRKLSD 1139          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A0K9NVS5_ZOSMR (Solute carrier family 22 member 1 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NVS5_ZOSMR)

HSP 1 Score: 62.4 bits (150), Expect = 2.450e-8
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   55 TVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDD 133
            TV+Y+ TPE+Y T  R+ G+G AS V RLGG++ P++A  L         ++VF  +M     AA + P+ET G +L D
Sbjct:  433 TVIYIYTPEIYPTSVRSTGVGVASSVGRLGGILCPLVAIGLLHSCHKTISIIVFEFVMFTAGVAAILFPLETKGRQLKD 511          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: K1RU89_CRAGI (Synaptic vesicle 2-related protein n=4 Tax=Crassostrea TaxID=6564 RepID=K1RU89_CRAGI)

HSP 1 Score: 62.4 bits (150), Expect = 2.450e-8
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   58 YLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKL 131
            Y+ TPE+Y T  RA+GLGS S++ R+G +V P +A+VL  +   +A +  +G I +V   AA ++PIET G ++
Sbjct:  443 YVYTPEVYPTSMRAIGLGSCSMMARIGAIVTPFVAQVLLKESSYLA-ISTYGVISIVATGAAILLPIETKGKEM 515          
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Match: A0A3N7GHC2_POPTR (MFS domain-containing protein n=1 Tax=Populus trichocarpa TaxID=3694 RepID=A0A3N7GHC2_POPTR)

HSP 1 Score: 61.2 bits (147), Expect = 2.620e-8
Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   55 TVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGGSVAPLVVFGPIMLVTAFAASMIPIETAGLKLDD 133
            T++Y+  PELY T  R  G+G AS V+R+GG+V P++A  L       A +V F  I+ V      + P ET GL L D
Sbjct:  134 TIVYIYAPELYPTFMRTTGVGVASSVSRIGGMVCPLVAVSLVQGCHQTAAVVFFASIVFVAGICVLLFPFETKGLDLAD 212          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10352.258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUA1_9PHAE6.870e-5559.01MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JL66_9PHAE1.510e-5464.00MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JDE1_9PHAE3.250e-5466.43MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FV27_ECTSI8.580e-4464.52Major facilitator transporter n=1 Tax=Ectocarpus s... [more]
A0A226EUC0_FOLCA1.580e-938.24Synaptic vesicle 2-related protein n=1 Tax=Folsomi... [more]
UPI0007EF83451.330e-836.71organic cation/carnitine transporter 7-like isofor... [more]
A0A161ZY97_DAUCS1.500e-836.71Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A0K9NVS5_ZOSMR2.450e-840.51Solute carrier family 22 member 1 n=1 Tax=Zostera ... [more]
K1RU89_CRAGI2.450e-841.89Synaptic vesicle 2-related protein n=4 Tax=Crassos... [more]
A0A3N7GHC2_POPTR2.620e-840.51MFS domain-containing protein n=1 Tax=Populus tric... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 8..131
e-value: 1.1E-11
score: 44.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..144
e-value: 7.2E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR24064FAMILY NOT NAMEDcoord: 14..132
NoneNo IPR availablePANTHERPTHR24064:SF457TRANSPORTER SVOPL-RELATEDcoord: 14..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..37
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..127
score: 12.335
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 8..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10352contigS-dermatodea_contig10352:5864..7751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10352.258.1mRNA_S-dermatodea_contig10352.258.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10352 5300..8094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10352.258.1 ID=prot_S-dermatodea_contig10352.258.1|Name=mRNA_S-dermatodea_contig10352.258.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
MWLCAEHRLGRVGALKWSAIGAAVSALIMAMVTNVTVLFAIMSIVTLFFN
AVPGTVMYLITPELYSTKYRAVGLGSASVVTRLGGLVAPILAEVLYDKGG
SVAPLVVFGPIMLVTAFAASMIPIETAGLKLDDDSWDRREGVSMKDSYIE
PTEGSYSDSAMDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
IPR036259MFS_trans_sf