prot_S-dermatodea_contig10350.257.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10350.257.1
Unique Nameprot_S-dermatodea_contig10350.257.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length340
Homology
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: D7G743_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G743_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.060e-160
Identity = 240/349 (68.77%), Postives = 283/349 (81.09%), Query Frame = 0
Query:    1 LGTPQSLIAFKAGSGKPSHSVACELETSPETCSCVASDESGHLMAAAFGKTVRIYANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGG-NGSGDARGAV-LLATGGEDGKLRVWELSADS--SRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTTGLPPSV---KAPLVMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGS--GRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFASGKAGVALGGYDLLAGSADYKITLFKSQG 340
            +G   S IAFK G+ +PSH++A ELETSPETC+CVA+  +G L+AAAFGK VRIYA+ P+GFH+LAE  AD A KESGV SMAF+ R  GG +GS +  G V LLATGGEDG LRVWEL AD+  + + DG   +RPPS+   +V  CKGH KP+TCVRFHPS  +VLTASKDGTCR+WD +R SEAALL TT+GLPP+    KAP++MCRSCCFSPDKPD IFSVQSG RG+AYVT WRYS+   D +  GRG+ C V+P++V+ VS HPAT+L+VRSDGARLAVGNVEGTVL+YRLPGFAKVME+PAHDLPVTGLGFAS + G ALGGYDLLAGSADYKI+LFKSQG
Sbjct:   43 VGNKISSIAFKGGAQQPSHAIAHELETSPETCNCVAASGNGQLLAAAFGKNVRIYASNPSGFHQLAEVEADFATKESGVLSMAFLDRNNGGRDGSREPDGGVTLLATGGEDGVLRVWELHADARTAGSGDGREGERPPSLSVHMVHACKGHEKPVTCVRFHPSGALVLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASTAKAPVIMCRSCCFSPDKPDAIFSVQSGGRGNAYVTEWRYSVRPDDDAPGGRGVACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFASREVGAALGGYDLLAGSADYKISLFKSQG 391          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A6H5JSJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ9_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 2.730e-157
Identity = 235/348 (67.53%), Postives = 282/348 (81.03%), Query Frame = 0
Query:    1 LGTPQSLIAFKAGSGKPSHSVACELETSPETCSCVASDESGHLMAAAFGKTVRIYANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGGN-GSGDARGAVLL-ATGGEDGKLRVWELSADS-SRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTTGLPPSV---KAPLVMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGS--GRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFASGKAGVALGGYDLLAGSADYKITLFKSQG 340
            +G   S IAFK G+ +PSH++A ELETSPETC+CVA+  +G L+AAAFGK VRIYA+ P+GFH+LAE  AD A KESGV SMAF+ R  GG+ GS +  G V+L ATGGEDG LRVWEL AD+ +   DG   +RPPS+  ++V  CKGH KP+TCVRFHPS  ++LTASKDGTCR+WD +R SEAALL TT+GLPP+    KAP++MCRSCCFSPD+PD IFSVQS  RG+AYVT WRYS+   D +  GRG+ C V+P++V+ VS HPAT+L+VRSDGARLAVGNVEGTVL+YRLPGFAKVME+PAHDLPVTGLGFA+ + G ALGGYDLLAGSADYKI+LFKSQG
Sbjct:   44 VGNKISSIAFKGGAQQPSHTIAHELETSPETCNCVAASGNGQLLAAAFGKNVRIYASNPSGFHQLAEVEADFATKESGVLSMAFLDRNNGGSDGSRETDGGVMLMATGGEDGVLRVWELHADARTGGGDGREGERPPSLSVRMVHACKGHEKPVTCVRFHPSGALMLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASIAKAPVIMCRSCCFSPDRPDAIFSVQSEGRGNAYVTEWRYSVRPDDDAPGGRGVACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFATREVGAALGGYDLLAGSADYKISLFKSQG 391          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A7S2AI78_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI78_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.580e-32
Identity = 114/353 (32.29%), Postives = 160/353 (45.33%), Query Frame = 0
Query:    5 QSLIAFKAGSG-KPSHSVACELETSPETCSCVASDESGHLMAAAF-GKTVRIYANIPAGFH---KLA----EFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSA-DSSRNYDGHSQDRPPSVQEKLVG-----ECKGHAKPITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTTGLPPSVKAPL---VMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFA-SGKAGVALGGYDLLAGSADYKITLFKS 338
            + ++  K G+  KP  SV C        C  + +D++G  +AA F G  V IY     GF    KLA    +F  D A K++ V+ + F            +  A  +A  GE+G +RVW +   D        S D        L+      E KGH KPI  + F+PS   V +ASKDGTCR+WD  +      L    G+P ++   +   VMCR C FSPD    +F+VQ   RG +YVT W  + ++ +    G      PI+           L +RSDG   A G+V G ++++       +   P H L VTGL F  S   G A   +DLL GSAD  + L  S
Sbjct:   49 KKMVTTKDGTDLKPLASVDC----GERLCLSLDADKNGTFIAAGFYGGNVAIY-----GFRADDKLAAVSDDFEGDKAVKDAAVDCVCFD----------PSENAARIAAAGEEGVVRVWAIEGKDEVMTSLADSADASEDKSSSLLKISKPLELKGHRKPIESICFNPSGLRVCSASKDGTCRIWDAVKGDCLHELPAADGIPATIVKKMTYNVMCRVCAFSPDGAK-VFTVQGACRGDSYVTRWDLTDDKVNLEKVGKLSTGTPIKC----------LAIRSDGLFAAAGDVTGNIVLFDTASLKTIKSEPLHQLTVTGLSFRPSASEGDA---FDLLTGSADKTVMLASS 368          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: B8CFV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFV5_THAPS)

HSP 1 Score: 99.0 bits (245), Expect = 3.470e-19
Identity = 67/216 (31.02%), Postives = 100/216 (46.30%), Query Frame = 0
Query:  128 HSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTT----GLPP-----------------SVKAPLVMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIE------EADGSGRGMKCAVEPI----------RVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVT 306
            H ++   ++Q   V EC GH K I  V FHP    VL+++KDGT R++  +   E  ++T       G PP                   + P ++ R C +   +   I+++ SG+RG+AY+T WR  +          G G G   A  P           RV C S  P +   + SDG  LA+G+VEG+VL+Y L   + + +   HDLPVT
Sbjct:  217 HLEENATTLQFHKVAECHGHTKAICAVNFHPRGMQVLSSAKDGTARVFCTESGVELGVMTCEVHDPNGPPPLKIDANAAAGKTKDPRMMKRPPQILVRGCAYGDLEGKTIYTIASGKRGAAYLTKWRTLVPLNSAPPNTAGGGGGPASATNPTTANMSFRQEYRVQC-SPVPISATALSSDGTLLALGSVEGSVLLYNLEKQSVMKQFEGHDLPVT 431          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A6T5VQI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VQI7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.410e-16
Identity = 69/241 (28.63%), Postives = 114/241 (47.30%), Query Frame = 0
Query:  103 LATGGEDGKLRVWELSADSSRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTTGLPPSVKAPL-VMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFASGKAGVALGGYDLL-----AGSADYKITLFK 337
            + T  + G +++W L+     N D    D+  S+          H   I  +  HP   +V+++SKDG+C++W+         +     L       L + CR  CFS D   L +S+QSG+RGS Y+     +I+  D S   +   ++ ++V  VS+ P T L      + LA+G+ +G++++       KV     HDLPVTGLGFA     + L   + +     + SADYK+T  +
Sbjct:   72 IITAEDFGNIKLWNLT---QLNDDEWKIDQVYSIT--------AHKAAIMDLSIHPLEPIVVSSSKDGSCKLWNIDNGELINEIPNARNLMKKSDPKLSIECRGSCFSIDGLHL-YSIQSGKRGSTYLFDRLITIQR-DNSTSKLTVDIKVLKVIEVSRVPCTKLKTNDKTSHLAIGSSDGSIVVVTTSNLKKVYSKQFHDLPVTGLGFAP----IILADEEEVDCIVNSCSADYKLTTIR 295          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: W4FSB6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.370e-14
Identity = 91/340 (26.76%), Postives = 139/340 (40.88%), Query Frame = 0
Query:   25 LETSPETCSCVASDESGHLMAAAFGKTVRIY-----ANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSADSSRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWD-----WQRTSEAAL---LTTTTGLPPSVKAPLVMCRSCCFSPDKPDL------------IFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFASGKAGVALGGYD------LLAGSADYKI 333
            ++T  +  S VA    G L+A   G    IY     A   A F  +  F+ D A  +S  N++ F            +     +ATGGEDG +R+W L+   S++          S +        GH   I  + +H S   V++ +KDG C +W      W++ +   L   L       P+ K   +  R C F P +  L            I +VQ+  RGS+Y+T W   +   D  G+G    +E +    V      +L V +    +A G+ +G VLI+R+   A +    AH LP TGL F    A       D      L++ SADY +
Sbjct:   70 IDTVDDLVSGVAIGSKGGLIALTMGSKTAIYRVTSGATPTASF--VVAFQTDFAATDSYQNAVKF------------SPDGGTIATGGEDGVVRLWTLTIPPSKSEVDVDNKYRKSFKVSAPVLLNGHNGCINGLSWHASGTKVVSCAKDGQCIVWTRVESTWKKAATLGLAGELDVQKPDKPTNKGNFIY-RGCAFVPRRFPLHASKKXXXXXXEIVTVQTPARGSSYLTKWSCVV---DDQGKG---TIEELTSIAVKDTIVCSLAVSAK--YVATGSSDGQVLIHRVDTLAHLKTFAAHFLPSTGLAFFPFAADATRDPLDFIDDLSLMSASADYSV 386          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A485KKL2_9STRA (Aste57867_8575 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.220e-13
Identity = 81/320 (25.31%), Postives = 131/320 (40.94%), Query Frame = 0
Query:   16 KPSHSVACELETSPETCSCVASDESGHLMAAAFGKTVRIYANIPAGFHK---LAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSADSSR----NYDGHSQDRPPSVQEKLVGEC-----KGHAKPITCVRFHPSANVVLTASKDGTCRMWD--------WQRTSEAALLTTTTGLPPSVKAP---LVMCRSCCF--SPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGF 310
            KP   V  E++T  +  S VA      L+A   G    +Y        K   + +F+ D A+++S  N + F            +     LATGGEDG +R+W L+  S+     + DG   D   +   K          +GH   I  + +H   N +L+ +KDG C +W         W++ +   L      L    KA      + R C F  + D    I ++Q+  RGS+Y+T W   +   D +G+ +   +  +R+           ++      +A G+ +G VL+YR      V    AH LP TG+ F
Sbjct:   62 KPLLDVVMEIDTGEQLISGVAIGSKDELLALTMGNKTAVYRVTDGPKGKAIFVTDFQTDFAKEDSYQNVVKF------------SPDGTQLATGGEDGIVRIWTLTIPSTDENEDDEDGDQADLDDAAYRKAFRVSAPIVLEGHNGCINGLSWHAMGNKLLSCAKDGQCILWSQTKKPPYTWKKAATLGLAGEL-ALQKEDKATNRGKFVYRGCQFEVADDDDASIVTLQTPARGSSYLTKWSVDV---DKNGKAVVEELSSVRL-----KDTIICSIAISDKYIACGSSDGQVLVYRFETLTHVKTTTAHYLPSTGIAF 360          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A067CDC6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDC6_SAPPC)

HSP 1 Score: 77.8 bits (190), Expect = 2.940e-12
Identity = 91/337 (27.00%), Postives = 149/337 (44.21%), Query Frame = 0
Query:   24 ELETSPETCSCVASDESGHLMAAAFG-KTV--RIYANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSA-DSSRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMW--------DWQRTSEAALLTTTTGLPPSVKAPL--VMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFA-------SGKAGVALGGYD----LLAGSADYKITL 335
            E++T  +  S V+    G L+A   G KTV  R+          + EF+ D A+ +S  + + F            +     LATGGEDG +RVW+L+  D   N +  ++    +   KL     GH+  I+ + +H ++  +L+ +KDG C +W         W +T +  L          VKA     + R+C F  D+   I ++Q+  RGS+Y+T W      ADG    ++ A  PI+   V    +  + +R     +A G+ +G +L++       +    AH LP TGL F        S      +  Y+    +L+GSADY + L
Sbjct:   67 EIDTGDDLVSGVSIGTKGGLVALTMGNKTVIYRVRHGSKTTSTYVTEFQTDFAKDDSYQSVLRF------------SPDGTKLATGGEDGIVRVWQLTLPDDDSNDETFAKKFKATEIAKLDN---GHSGCISGLSWHATSTKLLSCAKDGQCILWALTDKKKKTWTKTGKLGLAGELALQKLDVKANRGKFIYRACHFHHDE---IVTLQTPARGSSYLTKWA----AADGGKLFLEVASVPIKDVIVC---SMAINLRY----IACGSSDGQLLLFTYDALRLLKTISAHYLPSTGLAFLPPMLLDPSAHEDDRIREYEDDMTVLSGSADYSLYL 374          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A1V9ZU05_9STRA (60S ribosomal protein L24 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU05_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.440e-11
Identity = 76/299 (25.42%), Postives = 126/299 (42.14%), Query Frame = 0
Query:   25 LETSPETCSCVASDESGHLMAAAFG-KTV--RIYANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSADSSRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWD-----WQRTSEAALLTTTTGLPPSVKAPL-----VMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGF 310
            ++T  +  S V+    G L A   G KTV  RI   +      + EF+ D A  +S  + + F            +     LATGGEDG +R+W+L+  S       S+D     + +LV   +GH   I+ + +      +LT +KDG C +W      W +T +  +      LP   +         + R+C F     D+I ++Q+  RGS+Y+T W       DG           + V  V+      +++  +   +A G+ +G +++  L     +    AH LP TGL F
Sbjct:   68 IDTGEDLVSGVSLGSKGGLAALTMGNKTVLYRILHGVKTTSSHITEFQTDFALTDSYQSVLRF------------SPDGTKLATGGEDGNVRIWQLTIPSD-----DSEDFAKHFKAELVATLEGHGACISGLSWRNDNTQLLTCAKDGQCLLWGLKDEKWAKTGKLGIAGE---LPVQAQDKKNNRGKFIYRACHFHGGS-DVIVTLQTPARGSSYLTKW----SPVDGKF---------VEVLSVALPDVIAVSMAVNLRYVACGSSDGQLVLLALDSLRPIKTIAAHYLPSTGLAF 332          
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Match: A0A1V9ZEL2_9STRA (60S ribosomal protein L24 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEL2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.870e-11
Identity = 77/297 (25.93%), Postives = 126/297 (42.42%), Query Frame = 0
Query:   65 LAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGAVLLATGGEDGKLRVWELSADSSRNYDGHSQDRPPSVQEKLVGECKGHAKPITCVRFHPSANVVLTASKDGTCRMWD---------WQRTSEAAL---LTTTTGLPPSVKAPLVMCRSCCF---SPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAVEPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPAHDLPVTGLGFA-----------SGKAGVALGGYDLLAGSADYKITL 335
            + EF  D A  +S  + + F            +   + LATGG+DGK+R+W++        D   +    + +   V    GH   I+ + +H S   +L+ +KDGTC +W          W++  +  L   L+  T    S +   +  R+C F   S D  +L+ ++Q+  RGS+Y+T W+YS +    S   +   V    + C     AT L        +A G+ +G + +Y       +    AH LP TG+ F            + K G       +L+GSADY I L
Sbjct:    5 ITEFETDFAPDDSHQSVVKF------------SPNGLYLATGGQDGKVRIWQIVVPDESTEDSFKK----AFKVNEVATLDGHTGCISGISWHSSNTKLLSCAKDGTCFLWSLDKKGKKTQWKKCGKLGLAGELSIQTQQKQSNRGKFIY-RACHFHELSSDHFELL-TLQTPARGSSYLTKWQYSSDTK--SITELTSLVIKDTILC---SMATNLRY------IACGSSDGQLFLYSYRELLAIKTIAAHYLPSTGIAFLPRSQSSNNVEDNDKDGEYHDELTILSGSADYSIYL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10350.257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G743_ECTSI2.060e-16068.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSJ9_9PHAE2.730e-15767.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AI78_9STRA5.580e-3232.29Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
B8CFV5_THAPS3.470e-1931.02Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6T5VQI7_9STRA2.410e-1628.63Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
W4FSB6_9STRA6.370e-1426.76Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A485KKL2_9STRA1.220e-1325.31Aste57867_8575 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067CDC6_SAPPC2.940e-1227.00Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZU05_9STRA1.440e-1125.4260S ribosomal protein L24 n=1 Tax=Achlya hypogyna ... [more]
A0A1V9ZEL2_9STRA1.870e-1125.9360S ribosomal protein L24 (Fragment) n=1 Tax=Thrau... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 61..116
e-value: 0.77
score: 17.7
coord: 249..288
e-value: 20.0
score: 8.9
coord: 291..337
e-value: 100.0
score: 4.3
coord: 18..56
e-value: 28.0
score: 7.9
coord: 137..176
e-value: 5.1E-11
score: 52.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 139..176
e-value: 5.6E-10
score: 39.6
coord: 100..115
e-value: 0.19
score: 12.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 102..125
score: 9.305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 144..185
score: 14.151
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..339
e-value: 7.4E-42
score: 146.0
NoneNo IPR availablePANTHERPTHR23284PROLACTIN REGULATORY ELEMENT BINDING PROTEINcoord: 6..335
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 103..117
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 102..185
score: 13.896
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 23..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10350contigS-dermatodea_contig10350:137..4129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10350.257.1mRNA_S-dermatodea_contig10350.257.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10350 137..4129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10350.257.1 ID=prot_S-dermatodea_contig10350.257.1|Name=mRNA_S-dermatodea_contig10350.257.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=340bp
LGTPQSLIAFKAGSGKPSHSVACELETSPETCSCVASDESGHLMAAAFGK
TVRIYANIPAGFHKLAEFRADHAEKESGVNSMAFIRRTAGGNGSGDARGA
VLLATGGEDGKLRVWELSADSSRNYDGHSQDRPPSVQEKLVGECKGHAKP
ITCVRFHPSANVVLTASKDGTCRMWDWQRTSEAALLTTTTGLPPSVKAPL
VMCRSCCFSPDKPDLIFSVQSGQRGSAYVTTWRYSIEEADGSGRGMKCAV
EPIRVACVSKHPATTLTVRSDGARLAVGNVEGTVLIYRLPGFAKVMEHPA
HDLPVTGLGFASGKAGVALGGYDLLAGSADYKITLFKSQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf