prot_S-dermatodea_contig1028.206.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1028.206.1
Unique Nameprot_S-dermatodea_contig1028.206.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length134
Homology
BLAST of mRNA_S-dermatodea_contig1028.206.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.520e-12
Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 0
Query:   17 PSVSVASSLVNKPTAVDYSDLASILMDG-FNAHQDAVGAGSEFVTLGGDPYSDYSLSGT------PYIMQYG----ARAGPPSEHLPLLVEDKAGFGDFCGDISSISSDLTEALAAGVFDGDPCDPYF 133
            PS++ A ++ N+   +DYSDLAS+LMDG F+A +D     SE V+LG DPYSDY+LS        PY    G    A A  PS      +E   G   F G +    SD TE L A V D D  DPY+
Sbjct:  702 PSLARAETVSNR---IDYSDLASVLMDGGFDACKDGAEVRSEAVSLGEDPYSDYALSAESDIFLGPYHRSTGSSSSAPATEPSRRGSSQIEQDKGLAVFDGIVDQ--SDATEGLEASVLDVDVEDPYY 824          
BLAST of mRNA_S-dermatodea_contig1028.206.1 vs. uniprot
Match: A0A6H5K2V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V3_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.180e-9
Identity = 46/113 (40.71%), Postives = 55/113 (48.67%), Query Frame = 0
Query:   32 VDYSDLASILMDG-FNAHQDAVGAGSEFVTLGGDPYSDYSLSGTPYIMQY----------GARAGPPSEHLPLLVEDKAGFGDFCGDISSISSDLTEALAAGVFDGDPCDPYF 133
            +DYSDLASILMDG  +A +D     SE V+LG DPYSDY+LS    I  +           A A  PS       E   G   F G +    SD  + L A V D D  DPY+
Sbjct:  208 IDYSDLASILMDGGLDACKDGAEVRSETVSLGEDPYSDYALSAESDIFLWPNHRSTGSNSSAPATEPSRRGSSRTEQDKGLAGFDGIVDP--SDAPDGLEASVLDVDAEDPYY 318          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1028.206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQG8_ECTSI6.520e-1242.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2V3_9PHAE3.180e-940.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1028contigS-dermatodea_contig1028:11899..16457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1028.206.1mRNA_S-dermatodea_contig1028.206.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1028 11052..16462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1028.206.1 ID=prot_S-dermatodea_contig1028.206.1|Name=mRNA_S-dermatodea_contig1028.206.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=134bp
MCSAGLNPGLLEAGSSPSVSVASSLVNKPTAVDYSDLASILMDGFNAHQD
AVGAGSEFVTLGGDPYSDYSLSGTPYIMQYGARAGPPSEHLPLLVEDKAG
FGDFCGDISSISSDLTEALAAGVFDGDPCDPYF*
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