prot_S-dermatodea_contig1027.197.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1027.197.1
Unique Nameprot_S-dermatodea_contig1027.197.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length863
Homology
BLAST of mRNA_S-dermatodea_contig1027.197.1 vs. uniprot
Match: D8LU63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU63_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 3.540e-79
Identity = 401/979 (40.96%), Postives = 479/979 (48.93%), Query Frame = 0
Query:   20 RRLKKGGKRGRRLCHKDGCTLCPSFGFEGDVAVSCSHHKEEGMRNLTARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNKPRGGEGML--MTVARSSRRAAKANTAILEAEAAKTAEGAAXXXXXXXXEM-------AAAAGRGRSSSGGKDLLMRAAVTRKDLEAGYGDDGYGASR------ILGTRARSGGARPRLPYQ------GGPDDVVGKSNGMDSSRRQPNGARRGHHEERTAGSGAGPAGSGASAAFVARGDGRDSVAAGPSRKGVDSGKGXXXXXXXXLRSRGGGKRLGGAAVTAGVLGRPEAYLTSSRGDA------DDYHRRYGVGRTAVDVSFPGDFRGSVPMDGPFLMDGPGL---DNGNVGAPLGLGMSGGLEEI----LGVDSDTLDAKAKVAE---SFAARGSSGMVHSSI-------RAMRTAGSSGLGGPSIAGTGSGSVG--SVIGCGAGLSGGGG------------VDFELDNMPELDSMDLAGLRAVETGADIGRSARQIPQRTAMASSRAVSILGPRYGGGSTLAS---CSVTDVSAAPSSSSXXXXXXXXXXXXXXXXXAVRSTPSSTQADALVPAKLPS--------------------------------EDAWWEVLEGEDFVAMPEPIWGVP--LDAQSMPEDASRAHEDHRGWRGMKPSASAGPSVXXXXXXXXXSNGTGVGTPDGPGPKNDPTKNRSLLSSSPS---------LGGVLTMSDDDGYGGE--GRRGDGRGNGVDGXXXXXXXA-RMSPAKKRH-------RMTLGETHALP-THYSASASTRPSKRELQSSL---------IFSSAVSNASHAVHPGAPVGFGLSANAPSPMAIGNGSGVSMRSSAIGHGAGGGSLGKVWGVGDSWM-------SGDAVSPSKRLSLSPAKYVSA---SPSTSSRPL--LAQSTPPWGAGGLCPPRQQTQAAGRA 862
            RRLKKGGKRGRRLCH +GCTLCPSFGFEGDVAVSCSHHKE+GMRNLTARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RNKPRG EGML  MTV+RSSRRA KA+ AI  +          XXXXXXXX         +    R ++SSGGKDLLMR A++       +G  G GA         + +RAR+ G R R  Y+      G     +G+S     +                              AF+ARGDG ++  A PS    D+ + XXXXXXXX R RG  + LG A +TAGVL   EA++  SRG                  R AVD+SF GD R    MDG FLMDG        G  GA LG G+  G  E+    LG   DT + +  VA+   SFA   SS  V            A+R AG  G G  S A  G    G  S    G  L+ GGG            VDF LD++PEL S D AGL  VETG       R   Q       R  S  GP    G+ +A+    S   V     SS+XXXXXXXXXXXXXXXXX                                                     E+AWWEVLEGE+FVAMPEP WG    LD QSM E+  R +    GWR     +  G             +G G     G    +     RSL   S S         LGGV+ M  D+G+ G+  GR   GR  GV G         R+ P+ K+        R+    + ++P    +AS + RPS REL S+          +FS A S++ + V+P   +GFGL+ ++  P+  G   G  +RS+  G     G L K W  GD W        SGDA+SPSK LSLSPAK V+A   SPS+SS  L  LAQSTPPWG G LC P QQT+AA RA
Sbjct:   23 RRLKKGGKRGRRLCHMEGCTLCPSFGFEGDVAVSCSHHKEDGMRNLTARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNRNKPRGSEGMLSGMTVSRSSRRATKASIAIASSNXXXXXXXXXXXXXXXXXXXXXXXXXXSGGLARNQASSGGKDLLMRTAMSGDVGLGRHGAFGNGAKTHAAVAPAVASRARASGTRRRGSYRDSTTSDGDEKAELGRSFFGGGNHSNAXXXXXXXXXXXXXXXXXXXXXXXXXVAFIARGDGVEAANA-PS----DAARAXXXXXXXXXRPRGASRGLGSATITAGVLQHQEAFMPVSRGGGMLPVVETXXXXXXXXXRVAVDISFRGDTR----MDGSFLMDGGSFGETSGGAGGASLGAGVDTGRAELRSILLGDAGDTPEVRDSVADGGLSFAVPSSSARVAKPAPGVQAVHEALRPAGGLGFGRDSAASRGGEHAGARSSFESGGSLASGGGTAPAPAPAAGVFVDFGLDHLPELSSNDFAGLGGVETGVCANYLPRVTLQHHRYHQQRTAS-RGPYDLAGAAVAAGVFSSCEGVRLGSDSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAWWEVLEGEEFVAMPEPTWGGAGGLDTQSMMEEPFRTNPRGCGWR-----SDGGGRGGVETNRGMAESGRGPHGDGGRTVASHAATARSLSLDSSSITAATAAAGLGGVVVMPGDEGFSGDMSGRDSCGRNGGVHGISGGGGSGGRLCPSSKKFAGSVEDARVAFSTSPSMPGAPPAASRAMRPSSRELGSASTTSTSPSGSVFSPAASSSPNGVYP---IGFGLAVHSQDPLPHG---GAGLRSAGQGSAHENGGLSKAWVPGDMWATTATATTSGDAMSPSKCLSLSPAKAVTAMAASPSSSSPALSMLAQSTPPWGTGPLCSP-QQTRAASRA 979          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1027.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU63_ECTSI3.540e-7940.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1027contigS-dermatodea_contig1027:9800..13358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1027.197.1mRNA_S-dermatodea_contig1027.197.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1027 9800..13358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1027.197.1 ID=prot_S-dermatodea_contig1027.197.1|Name=mRNA_S-dermatodea_contig1027.197.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=863bp
SGGGGGGNGGAGSSPPSPTRRLKKGGKRGRRLCHKDGCTLCPSFGFEGDV
AVSCSHHKEEGMRNLTARRCQHEGCFTVANFGMPGDKPGFCAAHSTDGMV
NRNKPRGGEGMLMTVARSSRRAAKANTAILEAEAAKTAEGAAGAAAAKAE
EMAAAAGRGRSSSGGKDLLMRAAVTRKDLEAGYGDDGYGASRILGTRARS
GGARPRLPYQGGPDDVVGKSNGMDSSRRQPNGARRGHHEERTAGSGAGPA
GSGASAAFVARGDGRDSVAAGPSRKGVDSGKGGGGGGGGRLRSRGGGKRL
GGAAVTAGVLGRPEAYLTSSRGDADDYHRRYGVGRTAVDVSFPGDFRGSV
PMDGPFLMDGPGLDNGNVGAPLGLGMSGGLEEILGVDSDTLDAKAKVAES
FAARGSSGMVHSSIRAMRTAGSSGLGGPSIAGTGSGSVGSVIGCGAGLSG
GGGVDFELDNMPELDSMDLAGLRAVETGADIGRSARQIPQRTAMASSRAV
SILGPRYGGGSTLASCSVTDVSAAPSSSSSGTITSPVAAAAAAAVAAVRS
TPSSTQADALVPAKLPSEDAWWEVLEGEDFVAMPEPIWGVPLDAQSMPED
ASRAHEDHRGWRGMKPSASAGPSVGGGYQLGGGSNGTGVGTPDGPGPKND
PTKNRSLLSSSPSLGGVLTMSDDDGYGGEGRRGDGRGNGVDGGGGGGGGA
RMSPAKKRHRMTLGETHALPTHYSASASTRPSKRELQSSLIFSSAVSNAS
HAVHPGAPVGFGLSANAPSPMAIGNGSGVSMRSSAIGHGAGGGSLGKVWG
VGDSWMSGDAVSPSKRLSLSPAKYVSASPSTSSRPLLAQSTPPWGAGGLC
PPRQQTQAAGRA*
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