prot_S-dermatodea_contig10170.127.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10170.127.1
Unique Nameprot_S-dermatodea_contig10170.127.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length241
Homology
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BLAST of mRNA_S-dermatodea_contig10170.127.1 vs. uniprot
Match: D7FZF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF1_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 9.620e-22
Identity = 91/223 (40.81%), Postives = 112/223 (50.22%), Query Frame = 0 
Query:   46 SALFDKVATMSRRGQLWIMLRRKSMARAEPLLPGVDTGISTL--SVPLASSVDPSSSTEESSRTAQLEDT---EASTSAAHVEGKAGAPQAVGGGGWNLFGFFPKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------------------------SAKESSSDGSKGEDAGEGRPAVL-------WPRSAWIEGLDPRAQIEAAMAQYLRSTFGY 230
            + L D+ ATMSRR +LW +L+R+S ARAEPLL  VDT I +L  S  L+  V+   +   SS     E++    A    A    +  APQAVGG GWNLFGFFPKDK                 XXXXXXXXXXXX                              ++S+  SK  D  +  P          WP+SAW++GLDPRAQ+EAAM   LRS FGY
Sbjct:  539 AGLVDRAATMSRRARLWTLLKRRSRARAEPLLTSVDTSIMSLTPSELLSPPVEEQETALSSSSGRGPEESIGGGAGNGDATATSEVSAPQAVGGAGWNLFGFFPKDKFSDYLPAGPSPVVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVAKLAKASASWSKSGDTEDNEPEAXXXXXXPAWPKSAWLKGLDPRAQVEAAMRDALRSAFGY 761
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BLAST of mRNA_S-dermatodea_contig10170.127.1 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 3.040e-13
Identity = 86/250 (34.40%), Postives = 100/250 (40.00%), Query Frame = 0 
Query:   46 SALFDKVATMSRRGQLWIMLRRKSMARAEPLLPGVDTGISTLSVP-LASSVDPSSSTEESSRTAQLEDTEASTSAAHVEGKAG-------------APQAVGGGGWNLFGFFPKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAKESSSDGSKGEDAGEGRPAVL---------------------------------------------------WPRSAWIEGLDPRAQIEAAMAQYLRSTFGY 230
            + L D+ ATMSRR +LW +L+R+S ARAEPLL  VDT I +L+   L S       T  SS + +         A  V    G             APQAVGG GWNLFGFFPKDK                 XXXXXXXXXXXX                                                                           WP+SAW++GLDPRAQ+EAAM   LRS FGY
Sbjct:  557 AGLVDRAATMSRRARLWTLLKRRSRARAEPLLASVDTSIMSLTPSELLSPPVEEQETALSSSSGRGPQEPVGGGAGGVAASVGVGKGDATTTSEVSAPQAVGGAGWNLFGFFPKDKFSDYLPAGPSPVVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAWPKSAWLKGLDPRAQVEAAMRDALRSAFGY 806
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10170.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZF1_ECTSI9.620e-2240.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSL4_9PHAE3.040e-1334.40PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10170contigS-dermatodea_contig10170:2536..3883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10170.127.1mRNA_S-dermatodea_contig10170.127.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10170 2535..3883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10170.127.1 ID=prot_S-dermatodea_contig10170.127.1|Name=mRNA_S-dermatodea_contig10170.127.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=241bp
APVRPAVAKGAADAVKEQRRTIAEVGPAGRVSTRPRPGRVSLRFASALFD
KVATMSRRGQLWIMLRRKSMARAEPLLPGVDTGISTLSVPLASSVDPSSS
TEESSRTAQLEDTEASTSAAHVEGKAGAPQAVGGGGWNLFGFFPKDKEQE
QTRVAVSGSSASGRDTDPASAAVATAPSAKESSSDGSKGEDAGEGRPAVL
WPRSAWIEGLDPRAQIEAAMAQYLRSTFGYDGYGMAEGTVG
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