prot_S-dermatodea_contig10161.119.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10161.119.1
Unique Nameprot_S-dermatodea_contig10161.119.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length114
Homology
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 4.190e-32
Identity = 59/109 (54.13%), Postives = 80/109 (73.39%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYSILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLYAS-GKKGHHSRGGDIETGRVV 108
            MA+DQLLVATKFER QM A+FSF + Y+ FN+I+F+++PE+ RVIY  +DWG+++G +   AA++ F LVP+ GL+HY VFRLRE +Y + G     S   DIE G VV
Sbjct:   78 MAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYETCGSGSRPSSHSDIEKGGVV 186          
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 8.100e-30
Identity = 57/109 (52.29%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYSILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLYAS-GKKGHHSRGGDIETGRVV 108
            MA+DQLLVATKFER QM A+F F + Y+ FN+++F+++PE+ RVIY  +DWG+++G +   AA++ F LVP+ GL+HY VFRLRE +Y + G     S   DIE G VV
Sbjct:  167 MAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETCGGGSRPSSHSDIEEGGVV 275          
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.910e-17
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYSILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLY 88
            M +DQ LVA +F+   +    +FG+ YI FNV W+  +P++ R+IY ILDW DN  GA + A   +    P+FGLVH+G+FRLRE +Y
Sbjct:  170 MLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVY 257          
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.850e-17
Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYS-ILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLY 88
            M VDQLL+A  F+   M  T  +GL Y+ F+VIWF   PE+ + +Y   LDWG+N   A L+  + +  LVPI GL+H  VFRLRE LY
Sbjct:   65 MLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALY 153          
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.890e-17
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYSILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLY 88
            + +DQ LVA +F+   +    +FG+ Y+ FNV W+  +P++ R+IY ILDW DN  GA + A   +    P+FGLVH G+FRLRE +Y
Sbjct:   45 LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVY 132          
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.700e-16
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    1 MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYS-ILDWGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLY 88
            M VDQLL+A  ++   M  T  +GL Y+ F+V+WF + PE+ + +Y   LDW +N   A L+  + +  LVPI GL+H GVFRLRE LY
Sbjct:  147 MLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALY 235          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10161.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G735_ECTSI4.190e-3254.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMZ5_9PHAE8.100e-3052.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSI9_9PHAE1.910e-1746.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI2.850e-1748.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G734_ECTSI3.890e-1744.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVA0_9PHAE1.700e-1646.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 1..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 21..38
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10161contigS-dermatodea_contig10161:3879..5445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10161.119.1mRNA_S-dermatodea_contig10161.119.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10161 3226..7033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10161.119.1 ID=prot_S-dermatodea_contig10161.119.1|Name=mRNA_S-dermatodea_contig10161.119.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=114bp
MAVDQLLVATKFERSQMWATFSFGLTYIIFNVIWFVSSPENSRVIYSILD
WGDNLGGAILAAALILFALVPIFGLVHYGVFRLRECLYASGKKGHHSRGG
DIETGRVVATGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost