prot_S-dermatodea_contig1013.91.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1013.91.1
Unique Nameprot_S-dermatodea_contig1013.91.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length550
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.650e-8
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:    1 LPISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLK 46
            L    QGKY EAEPLYER Q+I EKV G EHP +A +LNNR  LL+
Sbjct:   13 LLFDIQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLR 58
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 9.200e-8
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:    2 PISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLK 46
            P   QGKY+EAEPLY+RCQ++  K  GPEHPSLA  LNNRA LL+
Sbjct:  182 PHCIQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLR 226
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.270e-7
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    6 QGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLK 46
            QGKYAEAEPLYER Q+I E   GPEHP++A ALNNRA LL+
Sbjct:   30 QGKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLE 70
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.120e-7
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    4 SFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLKK 47
            + QGKYAEAEPLYER Q+I E V GPEHP +  +LNNRA LL+K
Sbjct:  658 NIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEK 701
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 5.150e-7
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    4 SFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLKK 47
            + QGKYAEAEPLYER  +I EKV GPEHP +A +L+NRASLL++
Sbjct:  691 NIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.270e-6
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:    2 PISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLKK 47
            P + QGKY EAEPLYER Q+I EKV G EHP +A +LN+RA LL K
Sbjct:   10 PPACQGKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCK 55
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.460e-6
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    1 LPISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLL 45
            LP + QGK+AEAEPLY R   I E   GPEHP +A ALNNRA LL
Sbjct:  730 LPFTSQGKFAEAEPLYRRATEIWETALGPEHPQMATALNNRAGLL 774
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 4.340e-6
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    6 QGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNR 41
            QGKYAEAEPLYER Q+I EK+ GPEHP +A++LNNR
Sbjct:  291 QGKYAEAEPLYERSQAIREKMLGPEHPDVAQSLNNR 326
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 53.5 bits (127), Expect = 1.300e-5
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    6 QGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASL 44
            QGKY EAEPLY+R   I E V GP+HPS+A  LNN A L
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Match: A0A6H5KB97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB97_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.800e-5
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    3 ISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASL 44
            +  QGKYAEAEPLYER Q+I E V GPEH  + R+LNN A+L
Sbjct:  341 LEVQGKYAEAEPLYERSQAIRENVLGPEHSDVGRSLNNLAAL 382
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1013.91.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K3K8_9PHAE4.650e-863.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC1_9PHAE9.200e-866.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5H9_9PHAE2.270e-773.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXS7_9PHAE4.120e-768.18NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI5.150e-768.18NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMK1_9PHAE2.270e-665.22Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJK0_9PHAE3.460e-664.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE4.340e-675.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295281.300e-564.10tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5KB97_9PHAE2.800e-564.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 320..341
score: 37.27
coord: 241..258
score: 48.89
coord: 285..305
score: 59.05
coord: 176..194
score: 35.26
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 287..320
e-value: 2.9
score: 16.9
coord: 35..68
e-value: 0.002
score: 27.4
coord: 495..528
e-value: 5.4
score: 16.0
coord: 119..152
e-value: 1.3
score: 18.1
coord: 203..236
e-value: 0.0018
score: 27.5
coord: 161..194
e-value: 24.0
score: 11.7
coord: 77..110
e-value: 0.047
score: 22.8
coord: 329..362
e-value: 1.9
score: 17.5
coord: 371..404
e-value: 2.3
score: 17.2
coord: 413..446
e-value: 0.72
score: 18.9
NoneNo IPR availablePFAMPF13424TPR_12coord: 164..235
e-value: 1.2E-20
score: 73.5
coord: 464..525
e-value: 5.1E-16
score: 58.7
coord: 328..403
e-value: 5.0E-20
score: 71.6
coord: 412..460
e-value: 3.6E-9
score: 36.8
coord: 35..109
e-value: 2.5E-19
score: 69.4
coord: 274..318
e-value: 8.1E-9
score: 35.6
NoneNo IPR availablePFAMPF13374TPR_10coord: 6..32
e-value: 9.5E-4
score: 19.0
coord: 119..159
e-value: 1.1E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 6..142
coord: 189..254
coord: 274..355
coord: 108..186
coord: 442..544
coord: 315..438
coord: 357..460
IPR010069Filamentous haemagglutinin, 20-residue x2 repeatTIGRFAMTIGR01731TIGR01731coord: 203..217
e-value: 0.93
score: 7.6
coord: 161..175
e-value: 0.61
score: 8.2
coord: 329..343
e-value: 0.76
score: 7.9
coord: 495..508
e-value: 1.5
score: 7.0
coord: 287..301
e-value: 0.82
score: 7.8
coord: 413..427
e-value: 0.79
score: 7.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 439..549
e-value: 7.8E-34
score: 119.0
coord: 266..438
e-value: 1.3E-67
score: 229.9
coord: 145..259
e-value: 1.5E-45
score: 157.5
coord: 3..144
e-value: 8.4E-51
score: 174.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 9..235
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 466..539
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 281..447
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 287..528
score: 8.688
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 35..236
score: 17.716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1013contigS-dermatodea_contig1013:10899..16206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1013.91.1mRNA_S-dermatodea_contig1013.91.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1013 10899..16206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1013.91.1 ID=prot_S-dermatodea_contig1013.91.1|Name=mRNA_S-dermatodea_contig1013.91.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=550bp
LPISFQGKYAEAEPLYERCQSITEKVRGPEHPSLARALNNRASLLKKQGK
YTEADPLYLRAIEIRERVLGADHPDLAISLGTRGQLLRAQGDYAGAEPLY
RRAQEIFEKSSGPNHPHVATAVSDRALLLEKQGKYAEADPLYLRAIEIGE
KTLGPDHPDLATRLNNRAGLLKAQGKYEEAGPLYERSQAIREKVLGPEHP
AVATSLNNRAGLLESQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNN
WAGLLSICSSACNWNCLKLLCQVIDEKVLGPDHPDVATTLNNRAGLLESQ
GKYDEAEPLYERFQAIKEKVLGPEHPSLATTLNNRAGLLRAQGKYAEAEP
LYGRSQAIREKVLGPEHPDVATTLNDRAVLLESQGKYAGAEPLYERCQAI
YEKALGAEHPHVATSLNNRAGLLESQGKFAKAEPLYKRTQEIFEKSLGAD
HPNLATILNNGRGCWRGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNN
RAGLLESQEKYTEAIPLLERALSIRMKKLGEHHLGTVSSQNSLEIVRKKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR010069Fil_hemagglutn_20-aa_x2_rpt
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom