prot_S-dermatodea_contig10060.46.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10060.46.1
Unique Nameprot_S-dermatodea_contig10060.46.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length167
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig10060.46.1 vs. uniprot
Match: D7FUI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI3_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.260e-44
Identity = 105/193 (54.40%), Postives = 123/193 (63.73%), Query Frame = 0 
Query:    1 MDDSDDTP--DEELYASLRARLEELEKRV------PSREVQSES---GTETPRARE-FTIPGESRAPPPQSPEERKRSIALLTVQSVGVISIALSFGTAALYWLAGEYFVHLGPRDFPGSLSNRGKGLSS--IERTVEGAE-EGEAPAAPP--RRTMGGSTTREAFDFEGFPDAA----------RTVVPPDF 166
            MD SDDT   D E+YASLR RLEELEK+V      P  +VQ  +     +  R RE FTIP ES       PE+++RS ALLT+QSVGVIS ALSFGT ALYWLAG  FVHLGPR++PGS+S+RG   ++  IER   G +  G A  AP   RR MGGS+TREAF FEGFPD            + VVPPDF
Sbjct:    1 MDPSDDTSEGDAEMYASLRKRLEELEKQVGTSAPAPQEQVQEPAVAANNKGAREREWFTIPKES-------PEDKRRSRALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSMSSRGGASTAPGIERIAAGEDGNGGAQQAPQTKRRAMGGSSTREAFQFEGFPDVGGSGGGSGGVGKGVVPPDF 186
[Close]
BLAST of mRNA_S-dermatodea_contig10060.46.1 vs. uniprot
Match: A0A6H5KW30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW30_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.320e-42
Identity = 102/195 (52.31%), Postives = 120/195 (61.54%), Query Frame = 0 
Query:    1 MDDSDDTP--DEELYASLRARLEELEKRVPSRE--VQSESGTETP--------RARE-FTIPGESRAPPPQSPEERKRSIALLTVQSVGVISIALSFGTAALYWLAGEYFVHLGPRDFPGSLSNRGKGLSS--IERTVEGAEEGEAPAAPPR---RTMGGSTTREAFDFEGFPDAA-----------RTVVPPDF 166
            MD SDDT   D E+YASLR RLEELE RV +     Q E G E          R RE FTIP E+       PE+++RS+ALLT+QSVGVIS ALSFGT ALYWLAG  FVHLGPR++PGS+S+RG   ++   ER V G +E       P+   R MGGS+TREAF FEGFPD             + VVPPDF
Sbjct:   77 MDPSDDTSEGDAEMYASLRKRLEELENRVETSAPAAQEEQGQEPAVTANNRGAREREWFTIPKEA-------PEDKRRSLALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSVSSRGSAGTAPGFERIVVGEDENGGAQQVPQTQGRAMGGSSTREAFQFEGFPDVGGGGSXXXXXXXKGVVPPDF 264
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10060.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUI3_ECTSI1.260e-4454.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW30_9PHAE1.320e-4252.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..166
NoneNo IPR availableTMHMMTMhelixcoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10060contigS-dermatodea_contig10060:915..6956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10060.46.1mRNA_S-dermatodea_contig10060.46.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10060 841..8230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10060.46.1 ID=prot_S-dermatodea_contig10060.46.1|Name=mRNA_S-dermatodea_contig10060.46.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=167bp
MDDSDDTPDEELYASLRARLEELEKRVPSREVQSESGTETPRAREFTIPG
ESRAPPPQSPEERKRSIALLTVQSVGVISIALSFGTAALYWLAGEYFVHL
GPRDFPGSLSNRGKGLSSIERTVEGAEEGEAPAAPPRRTMGGSTTREAFD
FEGFPDAARTVVPPDF*
back to top